Detailed information NTG0630243

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: IUZ65_RS16485
• Genome accession: NZ_CP087590
• Coordinates: 3604972..3606495 (-)
• Length: 507 a.a.
• NCBI ID: WP_195704722.1
• Uniprot ID: -
• Organism: Vibrio sp. VB16
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3599972..3611495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IUZ65_RS16460 (IUZ65_016460)	-	3601026..3601193 (+)	168	WP_195704717.1	hypothetical protein	-
IUZ65_RS16465 (IUZ65_016465)	-	3601286..3601552 (+)	267	WP_195704718.1	YihD family protein	-
IUZ65_RS16470 (IUZ65_016470)	ccoG	3601755..3603173 (+)	1419	WP_195704719.1	cytochrome c oxidase accessory protein CcoG	-
IUZ65_RS16475 (IUZ65_016475)	-	3603234..3604250 (+)	1017	WP_195704720.1	serine/threonine protein kinase	-
IUZ65_RS16480 (IUZ65_016480)	-	3604294..3604893 (+)	600	WP_195704721.1	thiol:disulfide interchange protein DsbA/DsbL	-
IUZ65_RS16485 (IUZ65_016485)	comM	3604972..3606495 (-)	1524	WP_195704722.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
IUZ65_RS16490 (IUZ65_016490)	ilvG	3606919..3608565 (+)	1647	WP_195704723.1	acetolactate synthase 2 catalytic subunit	-
IUZ65_RS16495 (IUZ65_016495)	ilvM	3608565..3608834 (+)	270	WP_195704724.1	acetolactate synthase 2 small subunit	-
IUZ65_RS16500 (IUZ65_016500)	-	3608849..3609802 (+)	954	WP_195704725.1	branched-chain amino acid transaminase	-

Sequence

Protein

• Length: 507 a.a.
• Molecular weight: 55422.85 Da
• Isoelectric Point: 7.5090

>NTDB_id=630243 IUZ65_RS16485 WP_195704722.1 3604972..3606495(-) (comM) [Vibrio sp. VB16]
MVLAVIHSRASVGVDAPPVTVEVHISNGMPGFTLVGLPETTVKESRDRVRSAIINSNFEYPSKKITVNLAPADLPKEGGR
FDLPIALGILAAAEQIAVDKLGEYEFIGELALSGALRPVKGVLPAALAANKIQRCLVVPEENGDQAALVGKERHKSAASL
LEVCSALCGQDNLSLFQVERSEDKWVRSRDLQDVIGQQQGKRALEIAAAGGHNLLFLGPPGTGKTMLASRLCDLLPEMSD
DEALETASVASLTEQDINKFNWKKRPFRSPHHSSSMAALVGGGSIPRPGEISLAHNGLLFLDEMPEFERKVLDSMREPLE
SGEIVISRAAGKTRFPARFQLVGALNPSPTGYYDGDKSRINPQVVLRYLSRLSGPLLDRFDMSLEIPLLPKGMLAEGGDR
GETTHVIKSRVEEARAYMLKRSGKINALLTSREIEKFCILEKKDAEFLEDALHRLGLSIRAYHRIIKVARTIADLESNER
ISRAHLAEALGYRSMDRLLKLLNAQVI

Nucleotide

• Length: 1524 bp

>NTDB_id=630243 IUZ65_RS16485 WP_195704722.1 3604972..3606495(-) (comM) [Vibrio sp. VB16]
ATGGTACTGGCGGTTATTCACAGCCGAGCAAGTGTTGGGGTGGACGCTCCTCCTGTCACTGTTGAGGTGCATATAAGCAA
TGGTATGCCAGGTTTTACACTTGTTGGTTTGCCTGAAACCACTGTAAAAGAGTCTAGGGATCGAGTTAGAAGCGCGATAA
TTAACTCAAATTTTGAGTATCCGAGCAAAAAGATCACAGTAAACCTTGCCCCTGCTGATTTACCTAAAGAGGGAGGACGA
TTTGATTTACCTATTGCGTTAGGGATCCTCGCGGCGGCTGAACAGATAGCCGTTGATAAACTTGGCGAATATGAGTTTAT
TGGTGAGTTAGCGCTTTCTGGGGCGTTACGCCCGGTTAAAGGTGTATTACCTGCGGCGTTGGCGGCCAATAAAATTCAAC
GATGCTTAGTTGTACCTGAAGAAAATGGAGATCAAGCGGCATTGGTTGGCAAAGAGAGGCATAAATCCGCTGCAAGTCTT
TTGGAGGTGTGTTCGGCGTTATGCGGGCAAGACAACTTGTCTCTATTTCAGGTAGAAAGGTCTGAAGATAAATGGGTGCG
TAGCCGAGATTTACAAGATGTCATAGGTCAGCAACAGGGAAAGAGAGCATTGGAGATAGCTGCGGCAGGTGGACATAATC
TTCTTTTTCTCGGTCCGCCAGGTACAGGAAAAACCATGCTAGCTTCTCGACTTTGTGATTTATTGCCTGAAATGAGTGAT
GACGAAGCGCTTGAAACGGCCTCTGTGGCTTCTTTAACGGAGCAGGATATAAATAAGTTTAATTGGAAGAAAAGGCCTTT
TCGTTCTCCTCATCATTCATCTTCTATGGCGGCCTTAGTCGGTGGTGGTTCTATTCCTCGTCCGGGTGAGATTTCCCTAG
CACATAATGGATTGTTGTTTCTTGACGAAATGCCTGAATTTGAAAGAAAGGTGTTGGACTCAATGAGGGAACCATTAGAG
TCTGGAGAGATTGTTATTTCTAGAGCGGCGGGAAAGACCCGCTTTCCCGCCCGATTCCAGCTCGTTGGAGCACTGAACCC
AAGTCCCACAGGTTATTATGATGGCGACAAGTCTCGGATAAACCCTCAGGTAGTACTTCGTTATCTGAGTCGGTTATCGG
GGCCTCTATTGGATAGGTTTGATATGTCATTAGAGATCCCCTTATTGCCGAAAGGAATGTTAGCGGAAGGTGGAGATAGA
GGAGAAACTACGCATGTTATAAAGAGTAGAGTAGAAGAAGCACGAGCGTACATGTTAAAAAGATCAGGAAAAATAAATGC
ACTTCTAACAAGCCGAGAAATAGAAAAATTTTGTATTTTGGAGAAAAAAGACGCCGAGTTTTTAGAAGATGCACTACATA
GGTTAGGGTTATCAATACGTGCATATCATCGAATAATAAAGGTTGCTCGTACTATCGCTGATTTGGAATCTAATGAACGA
ATTAGCCGAGCACATTTAGCTGAAGCGTTGGGGTACCGTTCTATGGATAGGTTATTGAAATTATTAAACGCTCAGGTGAT
CTAG

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	81.46	100	0.815
comM	Vibrio campbellii strain DS40M4	80.868	100	0.809
comM	Glaesserella parasuis strain SC1401	63.851	100	0.641
comM	Haemophilus influenzae Rd KW20	63.116	100	0.631
comM	Legionella pneumophila str. Paris	48.795	98.225	0.479
comM	Legionella pneumophila strain ERS1305867	48.795	98.225	0.479
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.379	100	0.444