Detailed information NTG0628435

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: LO014_RS01295
• Genome accession: NZ_CP087300
• Coordinates: 259638..261059 (-)
• Length: 473 a.a.
• NCBI ID: WP_000840556.1
• Uniprot ID: N9KCU3
• Organism: Acinetobacter baumannii strain OC061
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 254638..266059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LO014_RS01280	lptG	255691..256761 (+)	1071	WP_000881086.1	LPS export ABC transporter permease LptG	-
LO014_RS01285	gpmI	256887..258434 (+)	1548	WP_005140210.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
LO014_RS01290	-	258450..259634 (+)	1185	WP_000939109.1	S41 family peptidase	-
LO014_RS01295	pilR	259638..261059 (-)	1422	WP_000840556.1	sigma-54 dependent transcriptional regulator	Regulator
LO014_RS01300	pilS	261083..262651 (-)	1569	WP_001160340.1	PAS domain-containing sensor histidine kinase	Regulator
LO014_RS01305	-	262662..263297 (-)	636	WP_000633798.1	response regulator	-
LO014_RS01310	pbpG	263510..264556 (+)	1047	WP_005140205.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
LO014_RS01315	thrC	264665..265804 (-)	1140	WP_000063593.1	threonine synthase	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 52981.16 Da
• Isoelectric Point: 6.9051

>NTDB_id=628435 LO014_RS01295 WP_000840556.1 259638..261059(-) (pilR) [Acinetobacter baumannii strain OC061]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYTNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDATENALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKVCMDWETPPKQLTEAAKTYLLQQHFPGNVRELRNMIERAITLSEDATIDVSHLHPAPLRANISNPFASAAQS
IQTTVAAPQVVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=628435 LO014_RS01295 WP_000840556.1 259638..261059(-) (pilR) [Acinetobacter baumannii strain OC061]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACTCAGTTTCATTACGATGCGTGTT
TAACCGACTTAAACCTACCCGATGGGAGCGGGATAGATTTAGTTAAACATGTCTCTCAAAATTATACTAATACTCCCATT
GCCGTTTTAACCGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAGTTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATGCTACCGAGAATG
CGTTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATCCAGCAGCTACGTATTGCAATTAAAAAAATTGCTCGCTCT
CAAGCACCGGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCTAACTTAGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCAATTAACTGCGGTGCCATTCCAACCGAACTCATGGAAAGTGAGCTTTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAGCAAGGCCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGCGCAGTACAGGAAAAAAAGATCCGACCTGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGATTTAGATTTATTGGTTAGACAAGGTAAATTCC
GTCAAGATTTATTCTTCCGTATTCATGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTAGCCAATCACTTTATTCAGAAAGTTTGTATGGATTGGGAAACGCCACCTAAACAATTAACAGAAGCGGCCAAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGCGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATG
CCACGATAGATGTATCTCATTTACATCCTGCTCCTCTAAGAGCGAATATTTCTAATCCTTTTGCTTCGGCTGCTCAAAGC
ATACAAACCACTGTGGCAGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACTTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGATTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

3D structure

• AlphaFold DB: N9KCU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	98.309	100	0.983
pilR	Pseudomonas aeruginosa PAK	51.198	97.04	0.497