Detailed information NTG0627016

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LN047_RS09490
• Genome accession: NZ_CP087159
• Coordinates: 2081193..2082719 (+)
• Length: 508 a.a.
• NCBI ID: WP_373981586.1
• Uniprot ID: -
• Organism: Achromobacter sp. JD417
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2076193..2087719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LN047_RS09465 (LN047_09455)	-	2076237..2076506 (+)	270	WP_006387993.1	HPr family phosphocarrier protein	-
LN047_RS09470 (LN047_09460)	ptsP	2076619..2078328 (+)	1710	WP_128828397.1	phosphoenolpyruvate--protein phosphotransferase	-
LN047_RS09475 (LN047_09465)	amt	2078520..2079758 (-)	1239	WP_056315887.1	ammonium transporter	-
LN047_RS09480 (LN047_09470)	-	2079787..2080125 (-)	339	WP_006218735.1	P-II family nitrogen regulator	-
LN047_RS09485 (LN047_09475)	-	2080800..2081075 (+)	276	WP_056315890.1	accessory factor UbiK family protein	-
LN047_RS09490 (LN047_09480)	comM	2081193..2082719 (+)	1527	WP_373981586.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
LN047_RS09495 (LN047_09485)	rpmI	2083029..2083226 (+)	198	WP_008159912.1	50S ribosomal protein L35	-
LN047_RS09500 (LN047_09490)	rplT	2083244..2083603 (+)	360	WP_006218741.1	50S ribosomal protein L20	-
LN047_RS09505 (LN047_09495)	pheS	2083681..2084703 (+)	1023	WP_056315894.1	phenylalanine--tRNA ligase subunit alpha	-
LN047_RS09510 (LN047_09500)	pheT	2084717..2087134 (+)	2418	WP_279990414.1	phenylalanine--tRNA ligase subunit beta	-
LN047_RS09515 (LN047_09505)	-	2087137..2087475 (+)	339	WP_081101104.1	integration host factor subunit alpha	-

Sequence

Protein

• Length: 508 a.a.
• Molecular weight: 52571.96 Da
• Isoelectric Point: 8.3692

>NTDB_id=627016 LN047_RS09490 WP_373981586.1 2081193..2082719(+) (comM) [Achromobacter sp. JD417]
MTLAVLASRALCGMHAHAVRVETHLGPGLPGFNVVGLVDTEVRESRERVRAAIINSGFEFPAGRITVNLSPADMPKESGR
FDLPIALGVLLASGQLAAPAQDNAPAGAPDPALAGLVLAGELSLTGALVPVAAPLVIALSVAGDAPDATLILPAGSAEQA
AWVPGLRVLSARCLADVAAHAAGVCLLPIAVPAPWPPAAPVPCLSDVRGQPGARRALEVAAAGGHSLLMLGPPGAGKSML
AARLPGLLPPLARNQALEAAAVATMAGMPDMLTGQPPFRAPHHSASVAALVGGGGRPRPGEISLAHHGVLFLDELPEFSR
RSLEALREPLEAGRVVISRALHAAQFPARFQLVAAMNPCPCGWRGHPARTCACTPDQVTRYAGKISGPLLDRIDLHVALP
PSDPAWMTAPPGESSQAVRERVVRCRERQMARQGKINAGLAGAELDEFCVMDADAQTLLQQAMRRLTGSARAMHRALRVA
RTIADLDGQAVLAASHVAQAVQYRRTGV

Nucleotide

• Length: 1527 bp

>NTDB_id=627016 LN047_RS09490 WP_373981586.1 2081193..2082719(+) (comM) [Achromobacter sp. JD417]
GTGACGCTTGCTGTACTTGCCAGCCGGGCCCTTTGCGGCATGCATGCCCATGCGGTCCGCGTGGAAACGCACCTGGGGCC
CGGGCTGCCGGGTTTCAACGTCGTCGGGCTGGTCGACACCGAAGTCCGGGAAAGCCGCGAGCGGGTCCGCGCGGCCATCA
TCAACAGCGGTTTCGAATTTCCGGCGGGGCGCATCACCGTCAACCTGTCGCCGGCGGACATGCCCAAGGAGTCCGGCCGC
TTCGATCTGCCGATTGCGTTGGGGGTGCTGCTGGCGTCCGGGCAGTTGGCTGCCCCCGCGCAAGACAACGCGCCGGCCGG
CGCACCGGATCCCGCGCTGGCCGGGCTGGTGCTTGCAGGCGAACTTTCCCTCACCGGGGCGCTTGTGCCCGTCGCCGCGC
CGCTGGTGATCGCCCTGAGCGTCGCCGGGGACGCGCCCGACGCCACGCTTATCCTGCCAGCCGGCAGCGCCGAGCAGGCC
GCCTGGGTTCCCGGCTTGCGTGTGCTGTCGGCCCGTTGCCTGGCGGACGTGGCAGCCCACGCAGCGGGCGTCTGCCTGCT
TCCCATTGCCGTGCCCGCGCCGTGGCCGCCCGCCGCGCCCGTCCCCTGTCTATCGGATGTGCGGGGCCAGCCGGGCGCGC
GGCGGGCGCTTGAAGTCGCGGCGGCGGGCGGCCACAGCCTGTTGATGCTGGGGCCGCCCGGTGCGGGCAAGAGCATGCTG
GCCGCACGCCTGCCGGGCCTGCTGCCGCCGCTGGCGCGCAATCAGGCGCTCGAAGCGGCGGCCGTGGCGACGATGGCCGG
AATGCCCGATATGCTCACCGGGCAGCCGCCGTTCAGGGCGCCGCACCATTCGGCGTCGGTAGCCGCGCTGGTCGGCGGCG
GCGGGCGCCCGCGGCCCGGTGAAATCAGTCTGGCGCATCACGGCGTGCTGTTCCTCGATGAGCTTCCGGAATTCAGCCGC
CGCTCGCTCGAGGCGCTGCGAGAGCCGCTGGAGGCGGGCAGGGTGGTCATCTCGCGGGCATTGCACGCCGCGCAGTTTCC
GGCCCGTTTTCAGCTCGTGGCCGCCATGAATCCCTGTCCTTGCGGCTGGCGCGGCCATCCGGCGCGCACGTGCGCCTGCA
CGCCGGATCAGGTGACGCGTTATGCGGGCAAGATATCGGGACCGCTGCTGGACCGGATCGATCTGCATGTGGCCCTGCCG
CCGTCCGATCCCGCCTGGATGACCGCGCCGCCCGGCGAATCGTCGCAAGCCGTCCGCGAGCGCGTGGTCCGCTGCCGTGA
ACGCCAGATGGCCCGCCAGGGCAAGATCAACGCCGGGCTGGCCGGGGCCGAGCTGGACGAATTCTGCGTGATGGATGCCG
ATGCCCAGACGCTGCTGCAGCAGGCCATGCGCCGCCTGACAGGCTCGGCGCGGGCGATGCACCGGGCGCTGCGCGTGGCC
CGCACGATCGCGGATCTGGACGGCCAGGCAGTGCTGGCGGCCAGTCATGTCGCGCAGGCGGTGCAATACCGGCGTACGGG
GGTATGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (412-504)

• Subunit ChlI of Mg-chelatase (ChlI) (21-153)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (204-402)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	48.924	100	0.492
comM	Vibrio campbellii strain DS40M4	47.451	100	0.476
comM	Haemophilus influenzae Rd KW20	46.887	100	0.474
comM	Glaesserella parasuis strain SC1401	45.56	100	0.465
comM	Legionella pneumophila str. Paris	44.914	100	0.461
comM	Legionella pneumophila strain ERS1305867	44.914	100	0.461
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	41.313	100	0.421