Detailed information NTG0627016

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: N1207_RS15090
• Genome accession: NZ_CP104097
• Coordinates: 2846681..2847946 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain GL-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2841681..2852946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N1207_RS15070 (N1207_15070)	yrrB	2843052..2843672 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
N1207_RS15075 (N1207_15075)	mnmA	2843758..2844873 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
N1207_RS15080 (N1207_15080)	iscSA	2844904..2846043 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
N1207_RS15085 (N1207_15085)	cymR	2846062..2846478 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
N1207_RS15090 (N1207_15090)	rarA	2846681..2847946 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
N1207_RS15095 (N1207_15095)	tcdA	2847986..2848750 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
N1207_RS15105 (N1207_15105)	aspS	2849085..2850863 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
N1207_RS15110 (N1207_15110)	hisS	2850877..2852151 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
N1207_RS15115 (N1207_15115)	yrzK	2852533..2852703 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=627016 N1207_RS15090 WP_014480427.1 2846681..2847946(+) (rarA) [Bacillus subtilis strain GL-4]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=627016 N1207_RS15090 WP_014480427.1 2846681..2847946(+) (rarA) [Bacillus subtilis strain GL-4]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993