Detailed information NTG0626224

Bioinformatically predicted

Overview

• Name: htrA
• Type: Regulator
• Locus tag: LOD77_RS10000
• Genome accession: NZ_CP086728
• Coordinates: 1959806..1960987 (+)
• Length: 393 a.a.
• NCBI ID: WP_171989296.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SS20
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1954806..1965987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOD77_RS09970 (LOD77_09945)	-	1955436..1958015 (+)	2580	WP_274505468.1	YfhO family protein	-
LOD77_RS09990 (LOD77_09965)	-	1958444..1959106 (-)	663	WP_274505469.1	YoaK family protein	-
LOD77_RS09995 (LOD77_09970)	rlmH	1959134..1959613 (-)	480	WP_130554909.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	-
LOD77_RS10000 (LOD77_09975)	htrA	1959806..1960987 (+)	1182	WP_171989296.1	trypsin-like peptidase domain-containing protein	Regulator
LOD77_RS10005 (LOD77_09980)	spo0J	1961050..1961808 (+)	759	WP_171989297.1	ParB/RepB/Spo0J family partition protein	Regulator

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 41154.80 Da
• Isoelectric Point: 4.2375

>NTDB_id=626224 LOD77_RS10000 WP_171989296.1 1959806..1960987(+) (htrA) [Streptococcus parasuis strain SS20]
MKKLLKFVILFVVGFLGGIGGYYFASSTLTQGNSTSNQANTTSVSNVQYTNDTSTTQAVEKVQDAVVSVINYQTQSSNSL
SSIFGNIESSDELAVAGEGSGVIYKKDGDTAYIVTNNHVISGAEKIDILLASGEKLSGELVGADTYSDIAVIKIAADKVT
TIAEFANSDTIKVGETAIAIGSPLGSVYANTVTQGIISSLSRTVTSQTEDGQTISTNAIQTDTAINPGNSGGPLINIQGQ
VIGINSSKITSSSVSSSGVAVEGMGFAIPSNDTVQIINQLETNGKVTRPALGVQMVNLTDLSTSQLEKAGLANTDLTSGV
LIVSTQSGLPADGKFEPYDVIIEIDGETIENKSDLQSELYKHQIGDTITVTYYRNNKKMTVDIKLTHSTDDLS

Nucleotide

• Length: 1182 bp

>NTDB_id=626224 LOD77_RS10000 WP_171989296.1 1959806..1960987(+) (htrA) [Streptococcus parasuis strain SS20]
ATGAAAAAATTATTGAAATTTGTTATTTTGTTTGTTGTTGGATTTTTAGGAGGAATTGGTGGGTATTACTTTGCTTCATC
AACTCTGACTCAAGGAAATTCTACTTCAAATCAAGCAAATACAACCAGTGTGAGCAATGTTCAATATACCAACGATACTT
CCACCACTCAAGCTGTGGAAAAAGTTCAAGATGCTGTTGTCTCCGTTATCAATTATCAAACTCAATCATCGAATAGCCTC
AGTTCTATTTTTGGCAACATTGAAAGTTCAGATGAGCTAGCTGTTGCTGGAGAAGGTTCAGGTGTTATTTATAAAAAAGA
TGGTGATACAGCATATATTGTTACAAACAACCACGTAATTTCAGGTGCTGAAAAAATCGATATACTTTTGGCTTCTGGAG
AAAAGCTTAGCGGAGAACTCGTAGGTGCAGATACTTATTCAGACATTGCTGTTATCAAAATTGCTGCAGATAAAGTGACC
ACTATTGCTGAATTTGCTAATTCAGACACAATTAAAGTTGGAGAAACTGCGATTGCAATTGGTAGCCCATTAGGAAGTGT
CTATGCAAATACAGTAACTCAGGGGATTATTTCTAGTCTCAGTCGTACAGTAACTTCACAAACAGAAGATGGCCAAACAA
TCTCAACAAATGCTATCCAGACTGATACAGCCATTAACCCAGGTAACTCAGGTGGACCACTTATCAATATTCAAGGACAA
GTTATCGGTATCAACTCAAGTAAAATAACCTCTAGTTCTGTCAGCAGTTCAGGAGTTGCAGTAGAAGGAATGGGCTTTGC
AATTCCCTCAAATGATACTGTACAGATAATTAATCAATTAGAAACAAATGGTAAAGTTACTCGTCCAGCTCTTGGCGTAC
AAATGGTCAATCTAACAGACCTATCTACTAGTCAATTAGAAAAAGCAGGATTAGCAAATACAGACTTAACATCTGGAGTA
CTAATTGTATCTACTCAATCAGGTTTGCCAGCTGATGGAAAATTTGAACCATATGATGTCATTATTGAAATCGATGGTGA
AACCATTGAAAATAAGAGTGATTTACAAAGTGAACTTTACAAGCATCAAATTGGCGACACCATAACTGTTACCTATTATA
GAAATAATAAGAAAATGACCGTTGACATTAAGTTGACACATTCAACGGATGATTTGTCATAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (289-385)

• Trypsin-like peptidase domain (Trypsin_2) (99-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
htrA	Streptococcus mutans UA159	61.266	100	0.616
htrA	Streptococcus gordonii str. Challis substr. CH1	59.898	100	0.601
htrA	Streptococcus pneumoniae Rx1	58.418	99.746	0.583
htrA	Streptococcus pneumoniae TIGR4	58.418	99.746	0.583
htrA	Streptococcus pneumoniae D39	58.418	99.746	0.583
htrA	Streptococcus pneumoniae R6	58.418	99.746	0.583
htrA	Streptococcus mitis NCTC 12261	57.908	99.746	0.578