Detailed information NTG0623188

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: LL142_RS05785
• Genome accession: NZ_CP086168
• Coordinates: 1124107..1125066 (+)
• Length: 319 a.a.
• NCBI ID: WP_002852903.1
• Uniprot ID: A0A5Y6P8U5
• Organism: Campylobacter jejuni strain CMP10190
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1119107..1130066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL142_RS05760 (LL142_05760)	neuB	1119609..1120649 (+)	1041	WP_227930710.1	N-acetylneuraminate synthase	-
LL142_RS05765 (LL142_05765)	neuC	1120646..1121764 (+)	1119	WP_199381276.1	UDP-N-acetylglucosamine 2-epimerase	-
LL142_RS05770 (LL142_05770)	-	1121761..1122426 (+)	666	WP_002878820.1	cytidylyltransferase domain-containing protein	-
LL142_RS05775 (LL142_05775)	-	1122414..1123244 (+)	831	WP_002894652.1	CatB-related O-acetyltransferase	-
LL142_RS05780 (LL142_05780)	waaV	1123236..1124048 (-)	813	WP_199381275.1	glycosyltransferase family 2 protein	-
LL142_RS05785 (LL142_05785)	waaF	1124107..1125066 (+)	960	WP_002852903.1	lipopolysaccharide heptosyltransferase II	Regulator
LL142_RS05790 (LL142_05790)	gmhA	1125047..1125607 (-)	561	WP_023890815.1	D-sedoheptulose 7-phosphate isomerase	-
LL142_RS05795 (LL142_05795)	rfaE1	1125604..1126989 (-)	1386	WP_199381274.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
LL142_RS05800 (LL142_05800)	rfaD	1126982..1127935 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
LL142_RS05805 (LL142_05805)	gmhB	1127936..1128496 (-)	561	WP_052795201.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
LL142_RS05810 (LL142_05810)	-	1128578..1128880 (+)	303	WP_002852762.1	c-type cytochrome	-
LL142_RS05815 (LL142_05815)	ccoS	1128903..1129109 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36766.44 Da
• Isoelectric Point: 10.4054

>NTDB_id=623188 LL142_RS05785 WP_002852903.1 1124107..1125066(+) (waaF) [Campylobacter jejuni strain CMP10190]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=623188 LL142_RS05785 WP_002852903.1 1124107..1125066(+) (waaF) [Campylobacter jejuni strain CMP10190]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5Y6P8U5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.984	100	0.95