Detailed information NTG0622389

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: LL045_RS09220
• Genome accession: NZ_CP086083
• Coordinates: 1904297..1906507 (-)
• Length: 736 a.a.
• NCBI ID: WP_394530103.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain EIP20A
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1899297..1911507

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL045_RS09190 (LL045_09175)	atpA	1899340..1900842 (-)	1503	WP_004255265.1	F0F1 ATP synthase subunit alpha	-
LL045_RS09195 (LL045_09180)	-	1901029..1901556 (-)	528	WP_029344288.1	F0F1 ATP synthase subunit delta	-
LL045_RS09200 (LL045_09185)	atpF	1901558..1902064 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
LL045_RS09205 (LL045_09190)	atpB	1902079..1902792 (-)	714	WP_038601808.1	F0F1 ATP synthase subunit A	-
LL045_RS09210 (LL045_09195)	-	1902837..1903052 (-)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
LL045_RS09215 (LL045_09200)	-	1903236..1904012 (-)	777	WP_029344289.1	alpha/beta hydrolase family protein	-
LL045_RS09220 (LL045_09205)	comEC	1904297..1906507 (-)	2211	WP_394530103.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LL045_RS09225 (LL045_09210)	comEA	1906488..1907135 (-)	648	WP_098393299.1	ComEA family DNA-binding protein	Machinery gene
LL045_RS09230 (LL045_09215)	-	1907195..1908556 (-)	1362	WP_311865731.1	ABC transporter permease	-
LL045_RS09235 (LL045_09220)	-	1908553..1909485 (-)	933	WP_394530105.1	ABC transporter ATP-binding protein	-
LL045_RS09240 (LL045_09225)	-	1909589..1909987 (-)	399	WP_038601821.1	hypothetical protein	-
LL045_RS09245 (LL045_09230)	-	1910091..1910654 (-)	564	WP_098393297.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84490.30 Da
• Isoelectric Point: 9.7959

>NTDB_id=622389 LL045_RS09220 WP_394530103.1 1904297..1906507(-) (comEC) [Lactococcus lactis subsp. lactis strain EIP20A]
MSYVLNKIPLIFLAYLSVILYFLIFNFNLLCLILFIFSSLLALYRKYYLVIPLLLVMGSFFLVVKMDTIKNSENQPTTLS
KITMIPDTIQVNGDLLSFLGKERGQNYQVYETLKSKKEQKFYQNLSQNCQLSFTGNLQIPEKQRNFNGFDNQKYLASQNI
YRQIMIDKTNKIVLNDTFDLHVLRRKAIVWSQTHFPKPMNDYMTGLLFGFLSKDFNQMGDIYSSLGIIHLFALSGMQVNF
FIDWFRRIILRLGITREKLNIWQIPFSIFYAFMTGFSVSVLRALFQKNIRQNSLDNLAVTTLLLMIVSPKFLLTTGGQLT
LFYAFVISMISHKFSELKGIRKLLTESSVISLSVLPLLILDFHIFQPFSILLTIGFGFLFDVILLPLLLGTFLLSLIGYS
FNINLIFKILEWLIHEVDLPLHYPLVLGNPRPIELLILFFLIGLLIDNLFKKRRQIIFAGLIVCSFIICKNPIYPSITAV
DIGQGDSIFFQDKFNKETILIDTGGRLALPQESWQKPQSQTNAEKTLIPYLESVGVSQIDQLILTHTDADHVGDFLNLAD
KIKIKEIWVSPGELTNNHFVQKLKKANIAIHISKVGDKIPIFDSALQVLSNGYTGKGDNNDSIVTYGNFYHTKFLFTGDL
EQEGEKELLKNYPKLKVDVLKVGHHGSKTSSNPDFIKEINPKLALISVGKENRYGHPNQETLETLKKYQIRILRTDQKGA
LKLMQINQQWRIQTVR

Nucleotide

• Length: 2211 bp

>NTDB_id=622389 LL045_RS09220 WP_394530103.1 1904297..1906507(-) (comEC) [Lactococcus lactis subsp. lactis strain EIP20A]
ATGAGTTATGTTTTGAATAAAATTCCTTTGATATTTTTAGCTTATCTTTCTGTTATATTGTATTTTTTAATTTTTAATTT
TAATTTACTTTGTCTCATTTTGTTCATTTTTTCAAGTTTACTTGCCTTATATAGAAAATATTATTTAGTCATCCCACTTT
TATTAGTTATGGGAAGTTTTTTCTTAGTAGTAAAAATGGATACGATTAAGAACAGTGAAAATCAGCCAACCACTCTTTCC
AAAATTACAATGATCCCCGACACGATCCAAGTTAATGGTGATTTATTAAGTTTTCTAGGAAAAGAAAGAGGACAAAATTA
TCAAGTTTACGAGACTCTAAAAAGCAAAAAAGAACAGAAATTTTATCAAAATCTAAGTCAAAATTGTCAGCTGAGTTTCA
CAGGAAACCTTCAAATTCCAGAAAAACAAAGAAATTTTAATGGATTCGATAACCAAAAGTATTTAGCGAGCCAGAATATT
TATCGGCAAATTATGATTGATAAAACTAATAAAATAGTTTTAAATGACACTTTTGACCTCCATGTTTTAAGACGAAAAGC
AATTGTCTGGTCACAAACTCATTTTCCAAAGCCAATGAATGACTATATGACTGGCTTACTTTTTGGCTTTTTAAGTAAAG
ATTTTAATCAAATGGGAGACATTTATAGTTCATTAGGAATTATTCATCTTTTTGCCTTATCGGGAATGCAAGTTAATTTT
TTCATTGATTGGTTTCGTAGAATTATTCTTCGACTAGGAATAACGAGAGAAAAATTAAATATTTGGCAAATTCCCTTTTC
AATCTTTTATGCATTTATGACAGGATTTTCGGTTTCAGTATTACGAGCTTTATTTCAAAAAAATATTCGTCAAAATTCTT
TAGATAATCTAGCGGTGACAACCCTTCTTCTGATGATTGTCAGTCCTAAATTTTTACTGACAACAGGAGGACAACTCACT
TTATTTTATGCTTTTGTTATTTCAATGATTAGTCATAAATTTTCAGAACTAAAAGGAATAAGAAAATTACTGACAGAATC
ATCAGTGATTTCTTTGAGTGTTTTACCTTTACTCATTTTGGATTTTCATATTTTTCAACCTTTTTCAATTTTACTGACGA
TTGGCTTTGGATTTTTATTTGATGTAATCTTATTGCCTTTACTATTAGGAACTTTTCTCTTGTCTCTAATTGGCTATAGT
TTTAATATAAATCTTATTTTTAAAATTCTTGAATGGCTAATTCATGAGGTTGATTTACCCTTGCATTATCCTTTGGTTTT
AGGGAATCCCAGGCCAATTGAATTATTAATCTTATTTTTCCTAATTGGTTTGTTAATTGATAATCTTTTTAAGAAAAGAA
GACAAATAATTTTTGCTGGCCTAATTGTTTGTAGTTTTATTATTTGTAAAAATCCAATTTACCCCAGTATCACAGCAGTT
GATATTGGTCAAGGAGATAGTATTTTTTTTCAAGATAAATTTAATAAAGAAACAATTTTGATTGATACAGGCGGACGATT
AGCCCTTCCGCAAGAAAGTTGGCAAAAACCTCAAAGTCAAACAAATGCCGAAAAAACACTCATTCCATATCTTGAATCTG
TTGGAGTAAGTCAAATCGACCAGCTCATTTTGACGCATACGGACGCTGACCATGTTGGAGATTTTTTGAATTTAGCTGAT
AAAATAAAAATAAAAGAAATTTGGGTTAGCCCCGGTGAATTGACAAATAATCATTTTGTACAAAAATTGAAGAAAGCAAA
TATTGCGATTCACATCAGTAAAGTTGGAGATAAAATTCCAATCTTTGATAGTGCTTTACAAGTTTTATCAAATGGTTATA
CAGGAAAAGGGGATAATAATGATTCTATCGTGACTTATGGAAATTTTTATCATACAAAATTTCTATTTACAGGGGATTTA
GAACAAGAAGGAGAAAAAGAACTGCTCAAGAATTATCCTAAATTGAAAGTTGATGTCTTAAAAGTAGGTCATCATGGCAG
TAAAACAAGTTCAAACCCTGACTTTATTAAAGAAATTAATCCCAAACTTGCCCTCATTTCGGTTGGCAAGGAAAATCGAT
ATGGACATCCCAACCAAGAAACTCTAGAAACATTAAAAAAATACCAAATCAGAATACTTAGAACCGATCAAAAGGGAGCG
CTTAAACTAATGCAAATCAATCAACAGTGGCGAATCCAAACAGTTAGATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (28-170)

• Competence protein (Competence) (206-446)

• Metallo-beta-lactamase superfamily (Lactamase_B) (483-689)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	76.766	100	0.768
comEC/celB	Streptococcus mitis SK321	44.879	100	0.452
comEC/celB	Streptococcus mitis NCTC 12261	44.609	100	0.45
comEC/celB	Streptococcus pneumoniae TIGR4	44.011	100	0.444
comEC/celB	Streptococcus pneumoniae Rx1	43.742	100	0.442
comEC/celB	Streptococcus pneumoniae D39	43.742	100	0.442
comEC/celB	Streptococcus pneumoniae R6	43.742	100	0.442