Detailed information NTG0621563

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LK431_RS04845
• Genome accession: NZ_CP085951
• Coordinates: 969529..971058 (-)
• Length: 509 a.a.
• NCBI ID: WP_111695689.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain FDAARGOS_1561
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 964529..976058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK431_RS04825 (LK431_04825)	xylB	965700..967181 (+)	1482	WP_172453991.1	xylulokinase	-
LK431_RS04830 (LK431_04830)	rfaD	967232..968158 (-)	927	WP_111695692.1	ADP-glyceromanno-heptose 6-epimerase	-
LK431_RS04835 (LK431_04835)	-	968211..968714 (-)	504	WP_111695691.1	protein disulfide oxidoreductase	-
LK431_RS04840 (LK431_04840)	deoC	968824..969495 (+)	672	WP_111695690.1	deoxyribose-phosphate aldolase	-
LK431_RS04845 (LK431_04845)	comM	969529..971058 (-)	1530	WP_111695689.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
LK431_RS04850 (LK431_04850)	yihA	971173..971790 (-)	618	WP_005626810.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
LK431_RS04855 (LK431_04855)	-	971895..972761 (+)	867	WP_172453990.1	VirK/YbjX family protein	-
LK431_RS04860 (LK431_04860)	oppF	972801..973799 (-)	999	WP_050948566.1	murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF	-
LK431_RS04865 (LK431_04865)	-	973796..974767 (-)	972	WP_050948565.1	ABC transporter ATP-binding protein	-
LK431_RS04870 (LK431_04870)	oppC	974777..975712 (-)	936	WP_005651799.1	oligopeptide ABC transporter permease OppC	-

Sequence

Protein

• Length: 509 a.a.
• Molecular weight: 55933.51 Da
• Isoelectric Point: 10.0225

>NTDB_id=621563 LK431_RS04845 WP_111695689.1 969529..971058(-) (comM) [Haemophilus influenzae strain FDAARGOS_1561]
MSLAIVYSRASMGVQAPLVTIEVHLSNGKPGFTLVGLPEKTVKEAQDRVRSALMNAQFKYPAKRITVNLAPADLPKEGGR
FDLPIAIGILAASDQLDASRLKQFEFVAELALTGQLRGVHGVIPAILAAQKSKRELIIAKQNANEASLVSDQNTYFAQTL
LDVVQFLNGQEKLPLATEIVKESAVNFSGKNTLDLTDIIGQQHAKRALTIAAAGQHNLLFLGPPGTGKTMLASRLTGLLP
EMTDLEAIETASVTSLVQNELNFHNWKQRPFRAPHHSASMPALVGGGTIPKPGEISLATNGVLFLDELPEFERKVLDALR
QPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGTHNRTSPQQIMRYLNRLSGPFLDRFDLSIEVPLLPQGSLQN
TGDRGETSTQVRKKVLKVREIQMARAGKINAYLNSKEIERDCKLNDKDAFFLEKALNKLGLSVRAYHRILKVSRTIADLQ
EEQQISQPHLAEALGYRAMDRLLQKLSNM

Nucleotide

• Length: 1530 bp

>NTDB_id=621563 LK431_RS04845 WP_111695689.1 969529..971058(-) (comM) [Haemophilus influenzae strain FDAARGOS_1561]
ATGTCCCTTGCTATTGTTTACAGCCGTGCTTCTATGGGTGTGCAAGCACCGCTTGTCACTATTGAGGTGCATTTAAGTAA
CGGAAAACCCGGATTTACGCTTGTTGGTTTGCCCGAAAAAACCGTGAAAGAGGCACAAGATCGGGTGCGTAGTGCATTGA
TGAATGCACAATTTAAATACCCAGCCAAACGCATTACCGTGAATCTCGCACCAGCAGATTTACCGAAAGAAGGCGGACGA
TTTGATTTGCCTATTGCCATCGGAATTTTAGCCGCATCGGATCAGCTTGATGCGAGCCGCTTAAAGCAATTTGAATTTGT
GGCAGAGCTTGCGCTTACTGGGCAATTGCGTGGCGTTCACGGCGTAATTCCCGCTATTCTTGCAGCACAAAAGTCAAAGC
GAGAATTAATTATCGCAAAGCAAAATGCCAATGAAGCCTCGCTTGTTTCTGATCAAAATACTTATTTTGCACAAACACTT
TTAGATGTGGTGCAATTTCTCAATGGTCAAGAAAAATTACCTCTCGCCACTGAAATTGTGAAAGAAAGTGCGGTAAATTT
TTCGGGTAAAAATACATTAGATTTAACGGATATTATCGGACAACAACATGCCAAACGAGCATTGACCATTGCTGCAGCAG
GGCAGCATAATTTACTCTTTCTTGGCCCTCCGGGCACAGGGAAAACGATGTTAGCTAGCCGATTAACAGGGCTTTTACCT
GAAATGACAGATTTAGAAGCGATTGAAACAGCATCTGTAACGAGTTTAGTACAAAACGAGTTAAATTTTCATAATTGGAA
ACAACGTCCTTTTCGTGCCCCGCACCATAGTGCATCAATGCCTGCTTTAGTTGGTGGTGGGACGATCCCTAAACCTGGTG
AAATATCCTTAGCAACAAATGGCGTACTTTTTCTTGATGAACTTCCAGAGTTTGAACGAAAAGTATTGGATGCACTACGT
CAGCCTTTGGAAAGTGGTGAGATTATTATTTCTCGTGCTAATGCAAAAATTCAATTCCCTGCTCGTTTTCAATTAGTCGC
AGCGATGAATCCAAGCCCCACAGGTCATTATACTGGAACACATAACCGCACTTCGCCGCAACAAATTATGCGTTATTTAA
ATCGACTTTCAGGGCCCTTTTTAGATCGCTTTGACTTGTCTATTGAAGTGCCTTTATTGCCACAAGGTAGCTTACAAAAT
ACGGGCGATCGTGGCGAAACCAGCACACAAGTTCGTAAAAAAGTGTTAAAAGTGCGTGAGATTCAAATGGCAAGAGCGGG
GAAAATTAACGCTTATTTGAACAGTAAAGAGATTGAGCGTGATTGCAAGTTAAACGATAAAGATGCCTTTTTCCTTGAAA
AAGCACTGAATAAACTTGGGCTTTCTGTTCGGGCTTATCATCGTATTTTGAAAGTATCTCGAACCATTGCCGATCTACAA
GAAGAACAACAAATTTCTCAACCGCACTTGGCTGAGGCCTTGGGCTATCGAGCAATGGACCGTTTGTTGCAGAAATTGTC
GAATATGTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (405-497)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (194-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	98.625	100	0.986
comM	Glaesserella parasuis strain SC1401	79.093	99.607	0.788
comM	Vibrio cholerae strain A1552	67.258	99.607	0.67
comM	Vibrio campbellii strain DS40M4	65.68	99.607	0.654
comM	Legionella pneumophila str. Paris	51.093	98.821	0.505
comM	Legionella pneumophila strain ERS1305867	51.093	98.821	0.505
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.796	100	0.473