Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   LK450_RS04790 Genome accession   NZ_CP085939
Coordinates   990497..991171 (+) Length   224 a.a.
NCBI ID   WP_018543646.1    Uniprot ID   A0A448AIB9
Organism   Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 985497..996171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK450_RS04760 (LK450_04760) - 985830..986114 (-) 285 WP_003025714.1 DUF3165 family protein -
  LK450_RS04765 (LK450_04765) typA 986179..988020 (-) 1842 WP_003032385.1 translational GTPase TypA -
  LK450_RS04770 (LK450_04770) - 988198..988923 (+) 726 WP_003032391.1 pseudouridine synthase -
  LK450_RS04775 (LK450_04775) - 988944..989324 (-) 381 WP_018543647.1 rhodanese-like domain-containing protein -
  LK450_RS04780 (LK450_04780) - 989318..989542 (-) 225 WP_003025724.1 YqgQ family protein -
  LK450_RS04785 (LK450_04785) - 989816..990343 (-) 528 WP_003032411.1 Dps family protein -
  LK450_RS04790 (LK450_04790) cclA/cilC 990497..991171 (+) 675 WP_018543646.1 A24 family peptidase Machinery gene
  LK450_RS04795 (LK450_04795) - 991166..991684 (-) 519 WP_003032357.1 VanZ family protein -
  LK450_RS04800 (LK450_04800) rlmN 991677..992759 (-) 1083 WP_018543645.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  LK450_RS04805 (LK450_04805) - 992793..993356 (-) 564 WP_026248195.1 YutD family protein -
  LK450_RS04810 (LK450_04810) sepM 993496..994551 (-) 1056 WP_003032358.1 SepM family pheromone-processing serine protease Regulator
  LK450_RS04815 (LK450_04815) coaD 994532..995029 (-) 498 WP_003032432.1 pantetheine-phosphate adenylyltransferase -
  LK450_RS04820 (LK450_04820) rsmD 995019..995567 (-) 549 WP_025271932.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 25185.47 Da        Isoelectric Point: 8.3081

>NTDB_id=621403 LK450_RS04790 WP_018543646.1 990497..991171(+) (cclA/cilC) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MIHFYFFLVGSIVASFLGLVVDRFPEQSILVPSSHCNACGQKLAPRDLVPVLSQLINRLRCRFCNSKIPIRYILLELTGG
CLFLATSLGYLNINRLVLLAMGMTLSLYDQREQEYPLLIWLIFHIFLLFLTSFNLLMVAFLALGILAHFVDLRIGAGDFL
FLASCSTIFHLTEVLLIIQIASIIGLLLFGLKSKKDRLAFVPCLFCGSSILIMIQFIVLHQNAL

Nucleotide


Download         Length: 675 bp        

>NTDB_id=621403 LK450_RS04790 WP_018543646.1 990497..991171(+) (cclA/cilC) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGATTCATTTTTATTTTTTCTTGGTTGGAAGCATTGTAGCTTCCTTTTTAGGGCTGGTCGTTGATCGTTTCCCTGAACA
GTCTATTCTCGTTCCTTCCAGTCATTGTAATGCTTGTGGACAGAAATTAGCACCTCGTGATTTAGTCCCTGTCCTTTCTC
AGCTTATCAATCGACTGCGTTGTCGGTTTTGCAACTCAAAAATTCCCATCCGTTACATCCTTCTAGAACTAACTGGTGGC
TGTCTCTTTCTTGCAACATCTTTAGGTTATCTAAACATCAACCGGCTCGTTTTGCTTGCAATGGGAATGACCTTATCCCT
TTATGATCAAAGAGAACAAGAATATCCTCTCCTCATCTGGTTAATCTTTCATATTTTTCTCCTTTTTTTGACAAGCTTCA
ATCTTTTAATGGTTGCTTTTTTAGCACTTGGGATTTTGGCTCACTTCGTTGATTTACGTATCGGTGCAGGAGACTTTCTT
TTTCTGGCATCTTGCTCAACTATTTTTCATCTGACTGAAGTTCTTCTCATTATTCAAATTGCTAGTATCATTGGTCTGCT
CCTTTTTGGTTTAAAATCAAAAAAAGACAGGTTAGCCTTTGTTCCCTGTCTTTTCTGTGGTAGCAGCATCCTGATAATGA
TACAATTTATCGTTCTTCACCAAAATGCCTTATGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-87)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448AIB9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

57.075

94.643

0.54
  cclA/cilC Streptococcus mitis NCTC 12261

56.604

94.643

0.536
  cclA/cilC Streptococcus pneumoniae TIGR4

56.132

94.643

0.531
  cclA/cilC Streptococcus pneumoniae Rx1

55.66

94.643

0.527
  cclA/cilC Streptococcus pneumoniae D39

55.66

94.643

0.527
  cclA/cilC Streptococcus pneumoniae R6

55.66

94.643

0.527