Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | N565_RS05605 | Genome accession | NC_022351 |
| Coordinates | 1052703..1053005 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni 00-2538 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1047703..1058005
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N565_RS05580 (N565_01085) | rpsR | 1048065..1048325 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| N565_RS05585 (N565_01086) | lon | 1048386..1050761 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| N565_RS05590 (N565_01087) | - | 1050778..1051425 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| N565_RS05595 (N565_02230) | fliW | 1051586..1051975 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| N565_RS05600 (N565_01088) | proC | 1051975..1052706 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| N565_RS05605 (N565_01089) | ctsT | 1052703..1053005 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| N565_RS05610 (N565_01090) | - | 1053002..1053664 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| N565_RS05615 (N565_01091) | - | 1053661..1054113 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| N565_RS05620 (N565_01092) | hemD | 1054110..1054739 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| N565_RS05625 (N565_01093) | thiE | 1054717..1055349 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| N565_RS05630 (N565_01094) | thiD | 1055339..1056151 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| N565_RS05635 (N565_01095) | - | 1056148..1056834 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| N565_RS05640 (N565_01096) | - | 1056831..1057592 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=62072 N565_RS05605 WP_002853046.1 1052703..1053005(+) (ctsT) [Campylobacter jejuni subsp. jejuni 00-2538]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=62072 N565_RS05605 WP_002853046.1 1052703..1053005(+) (ctsT) [Campylobacter jejuni subsp. jejuni 00-2538]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |