Detailed information NTG0615946

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LG327_RS08140
• Genome accession: NZ_CP085217
• Coordinates: 1735587..1736651 (+)
• Length: 354 a.a.
• NCBI ID: WP_404368271.1
• Uniprot ID: -
• Organism: Marinobacter sp. strain QJJ-212
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1730587..1741651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG327_RS08125 (LG327_08125)	rpmE	1731020..1731250 (+)	231	WP_404368263.1	50S ribosomal protein L31	-
LG327_RS08130 (LG327_08130)	-	1731524..1732795 (+)	1272	WP_404368266.1	malic enzyme-like NAD(P)-binding protein	-
LG327_RS08135 (LG327_08135)	-	1732898..1735399 (-)	2502	WP_404368268.1	penicillin-binding protein 1A	-
LG327_RS08140 (LG327_08140)	pilM	1735587..1736651 (+)	1065	WP_404368271.1	pilus assembly protein PilM	Machinery gene
LG327_RS08145 (LG327_08145)	-	1736651..1737217 (+)	567	WP_404368273.1	PilN domain-containing protein	-
LG327_RS08150 (LG327_08150)	-	1737214..1737825 (+)	612	WP_404368276.1	type 4a pilus biogenesis protein PilO	-
LG327_RS08155 (LG327_08155)	-	1737828..1738373 (+)	546	WP_404368279.1	pilus assembly protein PilP	-
LG327_RS08160 (LG327_08160)	pilQ	1738439..1740499 (+)	2061	WP_404368282.1	type IV pilus secretin PilQ	Machinery gene
LG327_RS08165 (LG327_08165)	aroK	1740623..1741189 (+)	567	WP_404368284.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37840.88 Da
• Isoelectric Point: 4.1329

>NTDB_id=615946 LG327_RS08140 WP_404368271.1 1735587..1736651(+) (pilM) [Marinobacter sp. strain QJJ-212]
MFGLFGKKSNAVLGVDVSSSSVKLLELSKQGERYRVESYAVEPLPPNAVVEKNITDVEAVGEALKRVAGKARTGVKQAAV
AVSGSAVITKLIQMNSGLNEFEMEDQITLEADQYIPYPLDEVAIDFEVQGPSDANPDQVDVLLAACRKENVDIREDALGI
AGLTAKIVDVEAYALERAFSLIEPQLDAQGEELIVAIVDIGATMTTLSVLAEGETVYTREQIFGGKQLTEEIQRRYGLSL
EEAGLAKKQGGLPDDYESEVLSPFREAVVQQVARALQFFFGASQYNAVDYVILAGGTASIQGLTTMVEEKTGTATLVANP
FADMAVGSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=615946 LG327_RS08140 WP_404368271.1 1735587..1736651(+) (pilM) [Marinobacter sp. strain QJJ-212]
GTGTTCGGATTGTTCGGTAAGAAATCCAATGCAGTACTGGGAGTGGACGTAAGCTCCAGCTCGGTGAAACTGCTAGAGCT
CTCAAAGCAGGGCGAACGCTACAGGGTTGAAAGCTACGCAGTGGAACCGCTGCCGCCAAACGCTGTAGTCGAGAAAAATA
TCACCGATGTCGAGGCGGTGGGTGAGGCGCTGAAGCGTGTCGCCGGCAAGGCTCGCACCGGTGTCAAACAGGCGGCTGTT
GCAGTCTCCGGTTCGGCGGTCATAACCAAGCTGATCCAGATGAACAGCGGGCTGAACGAGTTCGAGATGGAAGATCAGAT
CACCCTCGAGGCAGATCAGTATATTCCTTATCCGCTTGACGAGGTGGCCATCGATTTTGAAGTCCAGGGGCCATCCGATG
CAAACCCCGATCAGGTCGACGTTTTACTGGCAGCCTGCCGCAAGGAAAACGTTGATATCCGGGAAGACGCCCTTGGCATT
GCCGGACTGACGGCAAAAATCGTGGATGTCGAGGCCTATGCGCTCGAGCGGGCTTTCTCCCTGATCGAGCCTCAGCTTGA
CGCCCAGGGCGAAGAGCTGATTGTCGCCATTGTCGATATTGGCGCAACCATGACGACTCTCAGCGTTCTTGCCGAGGGCG
AGACGGTCTATACACGGGAGCAGATATTCGGGGGCAAACAGCTTACCGAAGAAATCCAGCGCCGTTACGGTCTTTCCCTT
GAGGAAGCGGGCCTCGCCAAGAAGCAGGGCGGCCTGCCAGACGACTACGAGTCCGAAGTGCTTTCCCCTTTCCGCGAAGC
GGTGGTCCAGCAGGTAGCCCGGGCCCTGCAGTTCTTTTTCGGTGCCAGCCAGTACAATGCCGTAGATTACGTGATATTGG
CCGGTGGCACTGCCTCGATTCAGGGTCTCACAACCATGGTGGAAGAGAAGACCGGCACGGCTACCCTCGTGGCCAATCCC
TTCGCTGATATGGCCGTGGGTTCCCGGGTTAACGCCTCTGCCCTCAGTAACGATGCGCCCTCGCTGATGATTGCCTGCGG
GCTTGCGATGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	54.52	100	0.545
comM	Acinetobacter nosocomialis M2	54.237	100	0.542
comM	Acinetobacter baylyi ADP1	52.542	100	0.525
pilM	Legionella pneumophila strain ERS1305867	46.045	100	0.46