Detailed information NTG0061555

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: SII_RS08400
• Genome accession: NC_022237
• Coordinates: 1741750..1742703 (-)
• Length: 317 a.a.
• NCBI ID: WP_003073994.1
• Uniprot ID: -
• Organism: Streptococcus intermedius C270
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1736750..1747703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SII_RS08375 (SII_1650)	-	1737110..1737496 (-)	387	WP_020999193.1	DUF1310 family protein	-
SII_RS08380	-	1737551..1737733 (-)	183	WP_041823287.1	hypothetical protein	-
SII_RS08385 (SII_1651)	-	1737730..1738122 (-)	393	WP_020999194.1	DUF1310 family protein	-
SII_RS08390 (SII_1652)	glmS	1738314..1740128 (-)	1815	WP_020999195.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
SII_RS08395 (SII_1653)	-	1740504..1741703 (-)	1200	WP_003073996.1	acetate kinase	-
SII_RS08400 (SII_1654)	comYH	1741750..1742703 (-)	954	WP_003073994.1	class I SAM-dependent methyltransferase	Machinery gene
SII_RS08405 (SII_1655)	comGG	1742794..1743120 (-)	327	WP_020999196.1	competence type IV pilus minor pilin ComGG	-
SII_RS08410 (SII_1656)	comGF/cglF	1743101..1743538 (-)	438	WP_003073990.1	competence type IV pilus minor pilin ComGF	Machinery gene
SII_RS08415	comGE/cglE	1743522..1743815 (-)	294	WP_041823288.1	competence type IV pilus minor pilin ComGE	Machinery gene
SII_RS10330 (SII_1657)	comGD	1743796..1744215 (-)	420	Protein_1655	competence type IV pilus minor pilin ComGD	-
SII_RS08420 (SII_1658)	comYC	1744175..1744492 (-)	318	WP_003075998.1	competence type IV pilus major pilin ComGC	Machinery gene
SII_RS08425 (SII_1659)	comYB	1744489..1745511 (-)	1023	WP_020999198.1	competence type IV pilus assembly protein ComGB	Machinery gene
SII_RS08430 (SII_1660)	comYA	1745453..1746394 (-)	942	WP_020999199.1	competence type IV pilus ATPase ComGA	Machinery gene
SII_RS08435 (SII_1661)	-	1746463..1746828 (-)	366	WP_003075933.1	DUF1033 family protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36031.00 Da
• Isoelectric Point: 4.5230

>NTDB_id=61555 SII_RS08400 WP_003073994.1 1741750..1742703(-) (comYH) [Streptococcus intermedius C270]
MNFEKIEQAYTLLLENIQEIQNDLLTNFYDALVEQNGIYLDGKTELATVKKNNEILNSLKLSKEEWRRSYQFLLMKAAQT
EPLQANHQFTPDSIGFIVTFLIDQLSNKEHIDVLEIGSGMGNLAETILNNTKKNVDYLGLELDDLLIDVSASIADVMDAK
VSFVQGDAVRPQVLKESDVIVSDLPIGYYPDDHIASRYEVASTQEHTYAHHLLMEQSLKYLKPGGYAIFLAPNNLLTSRQ
SQLLKNWLQKYVQIVAMIALPESLFGNAAYAKTIFVLKKQDEQAIQPFVYALSDLQNQAALLTFSEKFQNWRQESEI

Nucleotide

• Length: 954 bp

>NTDB_id=61555 SII_RS08400 WP_003073994.1 1741750..1742703(-) (comYH) [Streptococcus intermedius C270]
ATGAATTTTGAAAAAATTGAACAGGCCTATACGCTCCTGTTAGAAAATATCCAAGAAATCCAAAATGATCTTTTAACGAA
TTTTTATGATGCCTTGGTAGAGCAAAACGGGATTTATCTGGATGGAAAGACAGAGCTAGCCACTGTCAAAAAAAATAATG
AAATACTAAACTCTTTGAAATTAAGTAAAGAAGAATGGCGCAGGAGCTACCAATTTTTACTGATGAAGGCAGCCCAAACG
GAGCCTTTGCAAGCCAATCATCAATTTACTCCGGATTCTATTGGTTTTATCGTAACATTTCTCATTGACCAATTGAGTAA
TAAAGAACATATTGATGTTTTGGAAATTGGTAGCGGAATGGGGAATTTAGCAGAGACCATTCTCAATAATACAAAGAAAA
ATGTGGATTACCTAGGACTAGAATTGGACGATTTGTTAATTGATGTATCAGCTAGCATAGCAGATGTGATGGATGCAAAG
GTTAGTTTTGTACAAGGTGATGCAGTGCGCCCACAAGTATTAAAAGAAAGTGATGTGATTGTTAGCGATTTGCCGATTGG
CTATTATCCGGATGATCACATTGCATCGCGCTATGAAGTGGCTAGTACGCAAGAGCATACCTATGCCCATCATTTGTTAA
TGGAACAATCGCTCAAGTATCTGAAACCAGGCGGTTATGCGATATTTCTTGCGCCAAATAATTTATTAACTAGTAGGCAG
AGTCAATTATTGAAAAATTGGTTGCAAAAGTATGTTCAGATAGTTGCAATGATTGCGTTGCCGGAATCCCTTTTTGGAAA
TGCAGCGTATGCCAAAACAATTTTTGTGCTCAAAAAGCAAGACGAACAAGCTATTCAGCCATTTGTTTATGCTTTGTCTG
ATTTACAAAATCAAGCTGCCTTATTGACTTTTAGCGAAAAATTCCAAAATTGGAGGCAAGAAAGTGAAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (69-288)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	60.317	99.369	0.599
comYH	Streptococcus mutans UA159	60	99.369	0.596