Detailed information NTG0615531

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: NQZ90_RS00310
• Genome accession: NZ_CP102148
• Coordinates: 53569..54570 (+)
• Length: 333 a.a.
• NCBI ID: WP_014637277.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DNC15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 48569..59570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ90_RS00290 (NQZ90_00290)	-	49770..50594 (+)	825	WP_203200674.1	ABC transporter ATP-binding protein	-
NQZ90_RS00295 (NQZ90_00295)	-	50587..51330 (+)	744	WP_203200675.1	ABC transporter permease	-
NQZ90_RS00300 (NQZ90_00300)	-	51657..52385 (+)	729	WP_203200676.1	amino acid transporter	-
NQZ90_RS00305 (NQZ90_00305)	-	52411..53283 (+)	873	WP_044685500.1	ABC transporter ATP-binding protein	-
NQZ90_RS00310 (NQZ90_00310)	ruvB	53569..54570 (+)	1002	WP_014637277.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
NQZ90_RS00315 (NQZ90_00315)	-	54570..55316 (+)	747	WP_044668725.1	GNAT family N-acetyltransferase	-
NQZ90_RS00320 (NQZ90_00320)	-	55318..55941 (+)	624	WP_014637278.1	HAD-IA family hydrolase	-
NQZ90_RS00325 (NQZ90_00325)	comR	56046..56945 (+)	900	WP_044668723.1	helix-turn-helix domain-containing protein	Regulator
NQZ90_RS00330 (NQZ90_00330)	-	57154..58374 (+)	1221	WP_257110264.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 37587.09 Da
• Isoelectric Point: 4.5070

>NTDB_id=615531 NQZ90_RS00310 WP_014637277.1 53569..54570(+) (ruvB) [Streptococcus suis strain DNC15]
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEMHGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK

Nucleotide

• Length: 1002 bp

>NTDB_id=615531 NQZ90_RS00310 WP_014637277.1 53569..54570(+) (ruvB) [Streptococcus suis strain DNC15]
ATGACAAATCGAATTTTAGACATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCACAGAAATTAAA
TGAGTACATCGGTCAGGACAAGGTTAAGGACCAGCTCAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGCCCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATCGCCAACGAACTGGGTGTCAAT
ATCAAGCAGACTAGTGGTCCTGTTATTGAGAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTAGAGGAGATTCTTTACTCAGCCATGGAAGACTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAATACTACGAATTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCTGCTATTGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCTAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGACGGCCTGATT
GATGACAGCATTACGGACAAGGCTTTGACCATGCTGGACGTGGACCGTGAAGGTCTGGACTACGTGGACCAGAAGATTCT
CCGGACCATGATTGAGATGCACGGCGGTGGTCCTGTCGGCCTCAACACTCTGTCGGTCAATATTGCCGAGGAGCGTGAGA
CGGTGGAGGACATGTACGAACCTTACCTGATTCAGCAGGGATTCCTCATGCGGACGCGGACGGGGCGGGTTGCGACAGCC
AAGGCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (21-179)

• RuvB C-terminal winged helix domain (WHD_RuvB) (257-326)

• RuvB AAA lid domain (AAA_lid_4) (182-255)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.03	99.399	0.895
ruvB	Streptococcus pneumoniae R6	89.728	99.399	0.892
ruvB	Streptococcus pneumoniae D39	89.728	99.399	0.892
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.589	97.898	0.574
ruvB	Helicobacter pylori 26695	51.064	98.799	0.505
ruvB	Synechocystis sp. PCC 6803	50.479	93.994	0.474