Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexB   Type   Machinery gene
Locus tag   NQZ91_RS07015 Genome accession   NZ_CP102145
Coordinates   1409831..1411780 (-) Length   649 a.a.
NCBI ID   WP_257117212.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1404831..1416780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS06985 (NQZ91_06985) spx 1404966..1405364 (-) 399 WP_105111770.1 transcriptional regulator Spx -
  NQZ91_RS06990 (NQZ91_06990) recA 1405522..1406706 (-) 1185 WP_105110232.1 recombinase RecA Machinery gene
  NQZ91_RS06995 (NQZ91_06995) cinA 1406758..1407939 (-) 1182 WP_105122397.1 competence/damage-inducible protein A Machinery gene
  NQZ91_RS07000 (NQZ91_07000) - 1408009..1408584 (-) 576 WP_249338965.1 DNA-3-methyladenine glycosylase I -
  NQZ91_RS07005 (NQZ91_07005) - 1408584..1409225 (-) 642 WP_125266299.1 hypothetical protein -
  NQZ91_RS07010 (NQZ91_07010) ruvA 1409234..1409824 (-) 591 WP_105122400.1 Holliday junction branch migration protein RuvA Machinery gene
  NQZ91_RS07015 (NQZ91_07015) hexB 1409831..1411780 (-) 1950 WP_257117212.1 DNA mismatch repair endonuclease MutL Machinery gene
  NQZ91_RS07020 (NQZ91_07020) - 1411906..1412082 (-) 177 WP_161942998.1 hypothetical protein -
  NQZ91_RS07025 (NQZ91_07025) - 1412127..1412573 (-) 447 WP_257117213.1 DUF3021 domain-containing protein -
  NQZ91_RS07030 (NQZ91_07030) - 1412570..1413013 (-) 444 WP_105110239.1 LytTR family DNA-binding domain-containing protein -
  NQZ91_RS07035 (NQZ91_07035) - 1413162..1414082 (-) 921 WP_257117215.1 magnesium transporter CorA family protein -
  NQZ91_RS07040 (NQZ91_07040) hexA 1414120..1416660 (-) 2541 WP_257117216.1 DNA mismatch repair protein MutS Machinery gene

Sequence

Protein


Download         Length: 649 a.a.        Molecular weight: 73094.37 Da        Isoelectric Point: 5.4607

>NTDB_id=615475 NQZ91_RS07015 WP_257117212.1 1409831..1411780(-) (hexB) [Streptococcus suis strain DNS20]
MTNERIKTNHIIELPDILANQIAAGEVIERPASVVKELLENSIDAGATQIQIVIEEAGLKTIQITDNGEGIAHDEVRLAL
RRHATSKIKNQADLFRIRTLGFRGEALPSIASVSQMVIETATADHPHGILLEAKGGVVEKEEPISRPVGTQMTVSDLFYN
TPARLKYVRSQQAELSHIIDVVNRLSLAHPEISFTLINEGRELLATAGTGNLRQAISGVYGIASAKKMVEIVAEDLDFQV
SGYVSLPELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKLMVGRFPLAVIAIEIDPYLADVNVHPTKQEVRISKEKE
LMQLIREAIAQALKEQGLIPDALENLAKSSTRTKVKAEQTTLPLRETNLYYDTVKQDFFLKPEVVAEEIASLEMVEQSSQ
PEPKAAAIKFAQRLSADEQDAEHPALSQKELAKLANQLDQEQTSTFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERV
KYEYYREKIGEVDNSAQQLLVPYIFEFPQNDALTLSSKLDSLRQVGINLEEYGSNQFILREHPIWMQEEEIESGVYEMCD
MLLLTDQVSIKQYRAELAIMMSCKRSIKANHALDDYSARDLIRQLSHTKNPYNCPHGRPVLVNFSKSDMEKMFRRIQENH
TSLRELGKY

Nucleotide


Download         Length: 1950 bp        

>NTDB_id=615475 NQZ91_RS07015 WP_257117212.1 1409831..1411780(-) (hexB) [Streptococcus suis strain DNS20]
ATGACAAATGAGAGAATTAAAACAAATCATATTATTGAATTGCCAGATATTTTAGCCAATCAGATTGCAGCCGGAGAGGT
CATTGAGCGTCCGGCCAGTGTCGTTAAGGAGCTTTTGGAAAATTCCATCGATGCAGGCGCGACTCAGATTCAGATTGTGA
TTGAAGAAGCGGGGCTCAAGACCATTCAAATTACGGACAACGGCGAGGGCATTGCGCATGATGAGGTGCGCTTGGCCCTT
CGCCGTCATGCGACTAGCAAGATAAAAAATCAAGCGGACCTTTTTCGTATTCGGACCTTGGGTTTTCGTGGTGAGGCCCT
GCCCTCTATCGCCTCTGTCAGCCAGATGGTGATTGAAACGGCCACTGCGGATCATCCTCACGGCATCTTGCTGGAGGCTA
AGGGCGGGGTGGTTGAAAAAGAAGAACCTATCAGCCGTCCAGTCGGGACTCAGATGACGGTTTCGGATTTATTTTACAAT
ACCCCTGCTCGGCTCAAATATGTCCGCAGCCAGCAGGCCGAATTGTCTCACATTATCGACGTTGTCAACCGTCTCAGTCT
AGCCCATCCAGAAATCAGCTTTACTCTGATAAATGAAGGTCGGGAATTGCTTGCCACTGCTGGAACAGGCAATCTCCGTC
AGGCCATTTCTGGTGTCTACGGCATTGCATCGGCTAAGAAAATGGTTGAAATTGTTGCCGAGGACTTGGATTTTCAGGTG
TCGGGCTATGTTTCCTTACCCGAATTGACCCGGGCCAACCGCAACTACATCAGCATTTTCATCAACGGCCGCTACATCAA
GAATTTCCTGCTTAACCGAGCGATTTTGGAAGGATATGGCAGTAAGCTCATGGTCGGACGTTTTCCACTGGCGGTGATTG
CCATTGAGATTGACCCTTATCTGGCTGATGTCAATGTCCATCCGACCAAGCAGGAAGTCCGTATTTCCAAGGAAAAGGAG
CTGATGCAGCTCATTCGTGAAGCCATTGCTCAAGCCCTCAAGGAGCAAGGTTTGATTCCAGATGCTCTGGAAAATCTGGC
CAAGTCCAGTACCCGGACCAAGGTCAAGGCTGAGCAGACGACGTTACCGTTGCGTGAGACCAATCTCTACTACGACACGG
TCAAGCAAGATTTCTTCCTCAAGCCAGAGGTTGTGGCGGAGGAGATTGCGTCATTGGAAATGGTAGAGCAGTCGAGTCAG
CCTGAGCCTAAGGCCGCAGCTATCAAATTTGCCCAGCGTTTGTCAGCAGACGAGCAGGATGCCGAGCATCCAGCCCTCAG
TCAGAAAGAATTAGCCAAGTTGGCCAATCAGCTGGACCAAGAACAGACGTCAACCTTCCCAGAATTGGAATATTTTGGTC
AGATGCACGGAACCTATCTCTTCGCTCAAGGAAAGGGCGGTCTCTATATCATCGACCAGCACGCTGCTCAGGAGCGGGTC
AAGTACGAATATTACCGGGAGAAAATTGGCGAGGTGGACAATTCTGCCCAGCAACTTTTAGTGCCTTACATTTTTGAATT
TCCGCAAAATGATGCCCTGACCCTGTCCAGTAAGTTGGACAGCCTGCGCCAGGTCGGCATCAATCTAGAAGAGTACGGTA
GCAACCAATTCATCCTGCGGGAACATCCGATATGGATGCAGGAAGAGGAAATTGAGTCTGGGGTCTATGAGATGTGTGAC
ATGTTGCTCTTGACCGACCAAGTTTCCATCAAGCAGTATCGGGCTGAGTTGGCTATTATGATGTCCTGCAAGCGGTCGAT
TAAGGCTAACCATGCCTTGGATGACTATTCGGCGCGTGACCTCATTCGCCAGCTGTCCCACACGAAAAATCCTTATAACT
GTCCGCACGGTCGCCCAGTTTTAGTCAACTTCAGCAAGTCGGACATGGAAAAAATGTTCCGTCGCATTCAAGAAAATCAC
ACCTCTTTACGAGAATTAGGAAAGTATTAG

Domains

Predicted by InterProScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)

(32-123)

MutL C terminal dimerisation domain (MutL_C)

(451-593)

DNA mismatch repair protein, C-terminal domain (DNA_mis_repair)

(217-333)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

71.296

99.846

0.712