Detailed information NTG0614859

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: NQZ97_RS00855
• Genome accession: NZ_CP102136
• Coordinates: 142415..142822 (+)
• Length: 135 a.a.
• NCBI ID: WP_105152395.1
• Uniprot ID: -
• Organism: Streptococcus suis strain M105052_S26
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 137415..147822

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ97_RS00825 (NQZ97_00825)	-	137483..137824 (+)	342	WP_105152398.1	PTS lactose/cellobiose transporter subunit IIA	-
NQZ97_RS00830 (NQZ97_00830)	-	137824..139179 (+)	1356	WP_105152397.1	PTS sugar transporter subunit IIC	-
NQZ97_RS00835 (NQZ97_00835)	-	139198..140166 (-)	969	WP_105152396.1	S66 peptidase family protein	-
NQZ97_RS00840 (NQZ97_00840)	comGA	140252..141202 (+)	951	WP_043026808.1	competence type IV pilus ATPase ComGA	Machinery gene
NQZ97_RS00845 (NQZ97_00845)	comGB	141114..142151 (+)	1038	WP_249338910.1	competence type IV pilus assembly protein ComGB	Machinery gene
NQZ97_RS00850 (NQZ97_00850)	comGC	142153..142434 (+)	282	WP_043026803.1	competence type IV pilus major pilin ComGC	Machinery gene
NQZ97_RS00855 (NQZ97_00855)	comGD	142415..142822 (+)	408	WP_105152395.1	competence type IV pilus minor pilin ComGD	Machinery gene
NQZ97_RS00860 (NQZ97_00860)	comGE	142794..143087 (+)	294	WP_043026799.1	competence type IV pilus minor pilin ComGE	Machinery gene
NQZ97_RS00865 (NQZ97_00865)	comGF/cglF	143074..143508 (+)	435	WP_043026797.1	competence type IV pilus minor pilin ComGF	Machinery gene
NQZ97_RS00870 (NQZ97_00870)	comGG	143486..144013 (+)	528	WP_043026795.1	competence type IV pilus minor pilin ComGG	-
NQZ97_RS00875 (NQZ97_00875)	comGH	144070..145023 (+)	954	WP_256787745.1	class I SAM-dependent methyltransferase	Machinery gene
NQZ97_RS00880 (NQZ97_00880)	-	145074..146261 (+)	1188	WP_099871820.1	acetate kinase	-
NQZ97_RS00885 (NQZ97_00885)	-	146578..147129 (+)	552	WP_256787742.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 15334.57 Da
• Isoelectric Point: 9.8653

>NTDB_id=614859 NQZ97_RS00855 WP_105152395.1 142415..142822(+) (comGD) [Streptococcus suis strain M105052_S26]
MLRRKNKAFTLLESLLTLFVVSFLAVSLSGTVQTVFRSVQEEIFIWEFEAIYKDSQKLAASSRQKVNLAIGGQEVTNGYQ
AVEVPGNVEVLEEKNIKFEENGGNSSLTKIRFRLSRKTVTYQLYIGSGRYKKTEE

Nucleotide

• Length: 408 bp

>NTDB_id=614859 NQZ97_RS00855 WP_105152395.1 142415..142822(+) (comGD) [Streptococcus suis strain M105052_S26]
ATGCTAAGGCGAAAAAATAAGGCTTTCACGCTTTTGGAAAGTCTGCTGACCTTATTTGTTGTCAGTTTTTTAGCAGTTTC
TTTGTCGGGAACGGTGCAAACGGTCTTTCGGTCTGTTCAAGAAGAGATTTTTATCTGGGAATTTGAAGCTATCTATAAAG
ACAGTCAGAAATTGGCAGCCAGTTCCCGCCAAAAAGTGAACCTTGCTATCGGTGGACAGGAGGTTACAAATGGTTATCAG
GCTGTAGAGGTACCCGGAAATGTAGAGGTCTTGGAGGAGAAAAATATCAAATTTGAAGAAAATGGAGGAAATTCTTCCCT
GACCAAAATTCGTTTTCGGCTTAGTCGAAAGACAGTCACGTATCAATTATATATAGGGAGTGGTCGCTATAAGAAAACAG
AAGAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	48.819	94.074	0.459
comGD	Streptococcus mutans UA159	47.287	95.556	0.452
comGD	Streptococcus mutans UA140	47.287	95.556	0.452
comGD/cglD	Streptococcus pneumoniae TIGR4	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae D39	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae Rx1	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae R6	46.512	95.556	0.444
comGD/cglD	Streptococcus mitis SK321	45.736	95.556	0.437
comGD/cglD	Streptococcus mitis NCTC 12261	45.736	95.556	0.437
comGD	Lactococcus lactis subsp. cremoris KW2	40.625	94.815	0.385