Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   RBAU_RS15330 Genome accession   NC_022075
Coordinates   3145165..3147474 (-) Length   769 a.a.
NCBI ID   WP_020954299.1    Uniprot ID   -
Organism   Bacillus velezensis UCMB5033     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3140165..3152474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RBAU_RS15290 (RBAU_2999) - 3140625..3141056 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  RBAU_RS15295 (RBAU_3000) - 3141056..3141397 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  RBAU_RS15300 (RBAU_3001) - 3141390..3142871 (+) 1482 WP_007408671.1 Na+/H+ antiporter subunit D -
  RBAU_RS15305 (RBAU_3002) - 3142877..3143353 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  RBAU_RS15310 (RBAU_3003) - 3143353..3143637 (+) 285 WP_007408673.1 Na(+)/H(+) antiporter subunit F1 -
  RBAU_RS15315 (RBAU_3004) mnhG 3143621..3143995 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  RBAU_RS15320 (RBAU_3005) - 3144035..3144418 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  RBAU_RS15325 (RBAU_3006) comA 3144440..3145084 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  RBAU_RS15330 (RBAU_3007) comP 3145165..3147474 (-) 2310 WP_020954299.1 histidine kinase Regulator
  RBAU_RS15335 (RBAU_3008) comX 3147494..3147670 (-) 177 WP_007408675.1 competence pheromone ComX -
  RBAU_RS15340 (RBAU_3009) comQ 3147670..3148608 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  RBAU_RS15345 (RBAU_3010) degQ 3148739..3148879 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  RBAU_RS15350 (RBAU_3011) - 3149345..3149686 (+) 342 WP_007408677.1 hypothetical protein -
  RBAU_RS15355 (RBAU_3012) - 3149693..3150916 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 769 a.a.        Molecular weight: 89179.51 Da        Isoelectric Point: 8.7913

>NTDB_id=61007 RBAU_RS15330 WP_020954299.1 3145165..3147474(-) (comP) [Bacillus velezensis UCMB5033]
MKNFIKQFTISVIILSLVYVCYVSYININGIIIGTKVIENKNKQFQVIEMSETTYGKFVGLEKGDIILKINKEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFANRLINFLYIFPIFNIILEFFRKKLPFENIITNLN
LISFFLVTLSGFVLVFYHLYKYKYSEHAYILKVLILTNTLSFAPFLLFYVAPNILTGDYIFPALASASLLVLIPFGLVYQ
FVANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWAGTNALQMNPIRQTVFIFIVMFAVFYFKEIIDFKFRLKRFSEK
FNYQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKRDNEPDWEMYSKEFKKVTSEIGKI
IELNRGFLIKIGERGGSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKL
MFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYD
LGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDG
VGFNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=61007 RBAU_RS15330 WP_020954299.1 3145165..3147474(-) (comP) [Bacillus velezensis UCMB5033]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTCATTATCTTAAGCCTCGTTTATGTTTGCTATGTTTCATATATAAA
CATAAATGGGATTATAATCGGGACAAAAGTTATTGAAAATAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTA
CTTACGGGAAATTCGTAGGTTTAGAAAAAGGTGACATCATTTTAAAAATCAACAAAGAAAAACCATCTGCTAAATTTTTA
AAAGGAGATAATCTTAGTCATATCAAAAGTTTAGATGTAAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCACTTGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTTTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGACCATTTAGAGGACATTCATTTAACAGGTATGTCAATTTGTTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAATCGTCTAATCAATTTCTTAT
ATATATTTCCGATTTTTAATATTATCCTGGAATTTTTCCGTAAGAAATTACCTTTTGAAAACATTATAACAAACCTTAAT
CTTATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTGTTCTATCACTTATATAAGTATAAATATTCAGAGCA
TGCTTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGCACCTAATA
TTTTAACTGGTGATTATATATTTCCAGCACTGGCATCAGCCTCATTGCTTGTCCTTATCCCATTTGGATTAGTATATCAG
TTTGTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGGTATTATACTTTACTGGCTGTAATCCCAAC
GCTAGTTATTGTCGGAGTTTTATCGGTCTGGGCGGGAACAAATGCGCTTCAAATGAATCCTATTAGACAGACTGTTTTCA
TCTTTATCGTAATGTTTGCTGTATTTTACTTTAAAGAAATAATAGATTTTAAATTTCGTTTAAAACGTTTTTCTGAAAAA
TTTAATTATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGTATAACATCTTTAAAACAAATGTTTAAAGAACT
AAAAAAGACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATC
ATGATAAAAGGGATAATGAACCTGATTGGGAAATGTATTCAAAAGAATTTAAGAAGGTTACTTCAGAGATTGGAAAAATC
ATTGAGCTAAACCGCGGTTTCTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCTCCAT
TAATACACCGAGACTGACACGGGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAACG
TGATACAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTG
ATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTT
GAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATC
AGATGAATGAGCAGATGTCCGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGAT
TTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGG
CCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGA
AGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGT
GTCGGATTCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCT
TGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.486

100

0.757

Multiple sequence alignment