Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | JF634_RS06865 | Genome accession | NZ_CP083930 |
| Coordinates | 1367030..1367551 (+) | Length | 173 a.a. |
| NCBI ID | WP_002642765.1 | Uniprot ID | V9H7R1 |
| Organism | Simonsiella muelleri strain DSM 2579 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1362030..1372551
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JF634_RS06835 (JF634_06835) | - | 1362618..1364138 (-) | 1521 | WP_002642761.1 | fumarate hydratase | - |
| JF634_RS06840 (JF634_06840) | ampD | 1364428..1365000 (-) | 573 | WP_002642762.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| JF634_RS06845 (JF634_06845) | - | 1365176..1365850 (+) | 675 | WP_002642763.1 | YdcF family protein | - |
| JF634_RS06855 (JF634_06855) | pilE | 1366249..1366770 (+) | 522 | WP_002642764.1 | pilin | Machinery gene |
| JF634_RS06865 (JF634_06865) | pilE | 1367030..1367551 (+) | 522 | WP_002642765.1 | pilin | Machinery gene |
| JF634_RS06870 (JF634_06870) | edd | 1367624..1369456 (-) | 1833 | WP_002642766.1 | phosphogluconate dehydratase | - |
| JF634_RS06875 (JF634_06875) | - | 1369544..1370299 (+) | 756 | WP_002641156.1 | IS5 family transposase | - |
| JF634_RS06880 (JF634_06880) | ribF | 1370567..1371490 (-) | 924 | WP_002642767.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| JF634_RS06885 (JF634_06885) | - | 1371647..1372003 (+) | 357 | WP_002642768.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 18433.26 Da Isoelectric Point: 8.4316
>NTDB_id=608562 JF634_RS06865 WP_002642765.1 1367030..1367551(+) (pilE) [Simonsiella muelleri strain DSM 2579]
MKNNMQKGFTLIELMIVIAIIGILAAIALPAYQDYTVRAKISEALLAVSSVKTFIAEAFETDGYTGVTSAAAAYNKSKPK
SEKISKYVEDIQIDEITGAISVYIKNDKSLPKEAQNATLVLTPHVLGNALSEKVHGAIDWACSSTGTGTANARLLRAAQP
GTLPAKYAPSECR
MKNNMQKGFTLIELMIVIAIIGILAAIALPAYQDYTVRAKISEALLAVSSVKTFIAEAFETDGYTGVTSAAAAYNKSKPK
SEKISKYVEDIQIDEITGAISVYIKNDKSLPKEAQNATLVLTPHVLGNALSEKVHGAIDWACSSTGTGTANARLLRAAQP
GTLPAKYAPSECR
Nucleotide
Download Length: 522 bp
>NTDB_id=608562 JF634_RS06865 WP_002642765.1 1367030..1367551(+) (pilE) [Simonsiella muelleri strain DSM 2579]
ATGAAAAACAATATGCAAAAGGGCTTCACTCTCATTGAATTGATGATTGTGATTGCTATTATTGGGATTTTGGCGGCAAT
TGCATTGCCAGCATATCAAGATTATACTGTTCGCGCGAAGATATCTGAAGCGTTGTTGGCGGTATCATCTGTCAAAACTT
TTATTGCAGAAGCCTTTGAAACCGATGGGTACACAGGTGTAACCAGTGCTGCCGCCGCGTATAATAAGTCTAAACCCAAA
TCCGAAAAAATTAGTAAATATGTTGAAGACATTCAAATTGATGAAATAACAGGTGCAATTTCTGTTTACATCAAGAATGA
TAAAAGTTTGCCTAAAGAAGCACAAAATGCAACCCTTGTTTTGACTCCACACGTGTTGGGTAACGCCTTATCTGAAAAAG
TGCATGGCGCGATCGATTGGGCTTGTAGCAGCACAGGTACGGGTACAGCAAACGCTCGTTTGTTGAGAGCCGCTCAACCA
GGTACATTACCTGCTAAATACGCACCGTCTGAATGTCGCTAA
ATGAAAAACAATATGCAAAAGGGCTTCACTCTCATTGAATTGATGATTGTGATTGCTATTATTGGGATTTTGGCGGCAAT
TGCATTGCCAGCATATCAAGATTATACTGTTCGCGCGAAGATATCTGAAGCGTTGTTGGCGGTATCATCTGTCAAAACTT
TTATTGCAGAAGCCTTTGAAACCGATGGGTACACAGGTGTAACCAGTGCTGCCGCCGCGTATAATAAGTCTAAACCCAAA
TCCGAAAAAATTAGTAAATATGTTGAAGACATTCAAATTGATGAAATAACAGGTGCAATTTCTGTTTACATCAAGAATGA
TAAAAGTTTGCCTAAAGAAGCACAAAATGCAACCCTTGTTTTGACTCCACACGTGTTGGGTAACGCCTTATCTGAAAAAG
TGCATGGCGCGATCGATTGGGCTTGTAGCAGCACAGGTACGGGTACAGCAAACGCTCGTTTGTTGAGAGCCGCTCAACCA
GGTACATTACCTGCTAAATACGCACCGTCTGAATGTCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
51.337 |
100 |
0.555 |
| comP | Acinetobacter baylyi ADP1 |
38.202 |
100 |
0.393 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
37.222 |
100 |
0.387 |
| pilA2 | Legionella pneumophila str. Paris |
38.69 |
97.11 |
0.376 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
38.095 |
97.11 |
0.37 |