Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | K8M08_RS19785 | Genome accession | NZ_CP083749 |
| Coordinates | 3830661..3831704 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013210.1 | Uniprot ID | A0A5C5AE28 |
| Organism | Bacillus sp. CRB-7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3825661..3836704
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8M08_RS19750 (K8M08_19750) | - | 3825918..3826292 (+) | 375 | WP_001012332.1 | nucleoside 2-deoxyribosyltransferase | - |
| K8M08_RS19755 (K8M08_19755) | - | 3826372..3826860 (+) | 489 | WP_000764271.1 | hypothetical protein | - |
| K8M08_RS19760 (K8M08_19760) | - | 3826897..3827208 (-) | 312 | WP_001093243.1 | hypothetical protein | - |
| K8M08_RS19765 (K8M08_19765) | - | 3827461..3827676 (+) | 216 | WP_001008328.1 | DUF3912 family protein | - |
| K8M08_RS19770 (K8M08_19770) | - | 3827892..3829286 (-) | 1395 | WP_001094339.1 | L-cystine transporter | - |
| K8M08_RS19775 (K8M08_19775) | - | 3829393..3829635 (-) | 243 | WP_000440713.1 | DUF2626 domain-containing protein | - |
| K8M08_RS19780 (K8M08_19780) | - | 3829761..3830456 (-) | 696 | WP_000434131.1 | helix-turn-helix transcriptional regulator | - |
| K8M08_RS19785 (K8M08_19785) | comGA | 3830661..3831704 (+) | 1044 | WP_001013210.1 | competence protein ComGA | Machinery gene |
| K8M08_RS19790 (K8M08_19790) | comGB | 3831697..3832728 (+) | 1032 | WP_000471905.1 | comG operon protein ComGB | - |
| K8M08_RS19795 (K8M08_19795) | comGC | 3832740..3833039 (+) | 300 | WP_001178695.1 | comG operon protein ComGC | - |
| K8M08_RS19800 (K8M08_19800) | comGD | 3833036..3833491 (+) | 456 | WP_000810384.1 | comG operon protein ComGD | - |
| K8M08_RS19805 (K8M08_19805) | comGE | 3833484..3833786 (+) | 303 | WP_000829521.1 | competence type IV pilus minor pilin ComGE | - |
| K8M08_RS19810 (K8M08_19810) | comGF | 3833756..3834226 (+) | 471 | WP_000923091.1 | competence type IV pilus minor pilin ComGF | - |
| K8M08_RS19815 (K8M08_19815) | comGG | 3834223..3834594 (+) | 372 | WP_001231196.1 | competence type IV pilus minor pilin ComGG | - |
| K8M08_RS19820 (K8M08_19820) | - | 3834770..3835420 (+) | 651 | WP_000183845.1 | 2OG-Fe(II) oxygenase | - |
| K8M08_RS19825 (K8M08_19825) | aroK | 3835539..3836036 (+) | 498 | WP_000836642.1 | shikimate kinase AroK | - |
| K8M08_RS19830 (K8M08_19830) | - | 3836075..3836275 (+) | 201 | WP_000106081.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39304.72 Da Isoelectric Point: 8.7292
>NTDB_id=607667 K8M08_RS19785 WP_001013210.1 3830661..3831704(+) (comGA) [Bacillus sp. CRB-7]
MNGIESFANTILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRSDDLLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGTILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCQKKCSTVCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIESFANTILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKQCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRSDDLLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGTILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCQKKCSTVCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=607667 K8M08_RS19785 WP_001013210.1 3830661..3831704(+) (comGA) [Bacillus sp. CRB-7]
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGACAGAAGGATGTAGTGGTTCAACTGCGTATAGGAAAAGATTTAATGACGAAACAATGCATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACACTGGAGGATCCAGTTGAAAAAAGAAGTGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGACATTTAGTAATGACGACACTGCAT
ACAAATGATGCGAGAGGGACGATACTCAGGTTCATGGATTTTGGCATAACGAGGCAAGAGATTGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTTGAATTAAAGTGTCCGTTTTGCCAAAAAAAGTGCTCAACTGTATGCAAATCAATGAGGC
AAGTAAGACAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAACACGAAACATTAGAATCTTCGATACGAAAAGGATACGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGACAGAAGGATGTAGTGGTTCAACTGCGTATAGGAAAAGATTTAATGACGAAACAATGCATTGAAAAGGAGTTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACACTGGAGGATCCAGTTGAAAAAAGAAGTGACGATTTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGACATTTAGTAATGACGACACTGCAT
ACAAATGATGCGAGAGGGACGATACTCAGGTTCATGGATTTTGGCATAACGAGGCAAGAGATTGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTTGAATTAAAGTGTCCGTTTTGCCAAAAAAAGTGCTCAACTGTATGCAAATCAATGAGGC
AAGTAAGACAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAACACGAAACATTAGAATCTTCGATACGAAAAGGATACGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.637 |
100 |
0.576 |
| pilB | Vibrio campbellii strain DS40M4 |
36.261 |
100 |
0.369 |