Detailed information NTG0603662

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: K8U54_RS11795
• Genome accession: NZ_CP082928
• Coordinates: 2623033..2624523 (-)
• Length: 496 a.a.
• NCBI ID: WP_249910281.1
• Uniprot ID: -
• Organism: Pseudomonas fulva strain ZJU1
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2618033..2629523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8U54_RS11780 (K8U54_11760)	-	2618527..2619408 (+)	882	WP_249910438.1	ABC transporter permease subunit	-
K8U54_RS11785 (K8U54_11765)	-	2619491..2620366 (+)	876	WP_249910279.1	ABC transporter permease subunit	-
K8U54_RS11790 (K8U54_11770)	betT	2620838..2622811 (-)	1974	WP_249910280.1	choline BCCT transporter BetT	-
K8U54_RS11795 (K8U54_11775)	comM	2623033..2624523 (-)	1491	WP_249910281.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
K8U54_RS11800 (K8U54_11780)	-	2624557..2624829 (-)	273	WP_070885918.1	accessory factor UbiK family protein	-
K8U54_RS11805 (K8U54_11785)	glnK	2625220..2625558 (+)	339	WP_003096476.1	P-II family nitrogen regulator	-
K8U54_RS11810 (K8U54_11790)	-	2625599..2626915 (+)	1317	WP_070885919.1	ammonium transporter	-
K8U54_RS11815 (K8U54_11795)	-	2627033..2628286 (+)	1254	WP_249910282.1	ammonium transporter	-
K8U54_RS11820 (K8U54_11800)	-	2628418..2628843 (+)	426	WP_249910439.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
K8U54_RS11825 (K8U54_11805)	sutA	2628920..2629240 (+)	321	WP_070885922.1	transcriptional regulator SutA	-

Sequence

Protein

• Length: 496 a.a.
• Molecular weight: 52846.63 Da
• Isoelectric Point: 7.4166

>NTDB_id=603662 K8U54_RS11795 WP_249910281.1 2623033..2624523(-) (comM) [Pseudomonas fulva strain ZJU1]
MSLAIVHSRAQVGVDAPAVTVEAHLANGLPSLALVGLPETAVKESKDRVRSAILNCALDFPPRRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGESLTSLECLGELALSGAIRPVQGVLPAALAARQAGRTLVVPRENAEEASLATGLSVLAVDHL
LELVAHLNGQTPLAPYQAEGLLRHTQPYPDLAEVQGQIAAKRALLVAAAGGHNLLLSGPPGTGKTLLASRLPGLLPPLTE
EEALQVAAIRSVASHTPLQSWPQRPFRHPHHSASGPALVGGGSRPQPGEITLAHHGVLFLDELPEFDRRVLEVLREPLES
GHIVIARARDKVAFPARFQLVAAMNPCPCGFLGDPSGRCRCSPEQIQRYRGKLSGPLLDRIDLHITVARESTQLDAPPDN
GETSAAAASRVAAARDIQLQRQGIANAFLDLPGLRTHCHLADADRQWLEHACERLTLSLRSAHRVLKVARTLADLQAEER
ISRQHLAEALQYRTSL

Nucleotide

• Length: 1491 bp

>NTDB_id=603662 K8U54_RS11795 WP_249910281.1 2623033..2624523(-) (comM) [Pseudomonas fulva strain ZJU1]
ATGTCATTGGCCATCGTCCATAGCCGCGCCCAGGTCGGCGTCGATGCACCCGCAGTGACCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCCTCCCTGGCCCTGGTCGGGCTGCCGGAAACCGCGGTCAAGGAATCCAAGGACCGCGTACGCAGCGCCATCC
TCAACTGTGCCCTGGATTTCCCACCGCGCCGTATCACCCTGAATCTCGCCCCAGCGGATCTGCCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCCCTGGGCATCCTTGCCGCCAGCGGCCAGCTACCCGGCGAATCCCTGACCAGCCTCGAATGCCT
CGGCGAGCTCGCCCTGTCCGGTGCGATTCGCCCGGTTCAGGGCGTACTGCCCGCCGCACTGGCTGCCCGGCAAGCCGGTC
GCACCCTGGTGGTACCCAGGGAAAACGCCGAGGAGGCCAGCCTGGCTACCGGTCTCAGCGTTCTGGCGGTCGATCACCTG
CTGGAGTTGGTCGCGCACCTCAACGGCCAGACGCCGCTGGCGCCCTACCAGGCCGAGGGCCTGTTGCGCCATACCCAGCC
CTACCCGGACCTTGCCGAAGTGCAGGGCCAGATCGCCGCCAAGCGTGCCCTGCTGGTGGCCGCTGCCGGCGGCCACAATC
TGTTGCTGAGCGGGCCGCCGGGAACCGGCAAGACGCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGCCGCTCACCGAA
GAGGAGGCCCTGCAGGTCGCCGCGATACGCTCGGTGGCCAGCCACACGCCGCTGCAGAGTTGGCCACAGCGCCCTTTCAG
GCACCCGCACCACAGCGCATCCGGCCCGGCCCTGGTGGGCGGTGGCAGCCGCCCGCAGCCGGGAGAAATCACCCTGGCCC
ACCACGGCGTCCTGTTTCTGGACGAATTACCCGAGTTCGACCGCCGCGTGCTCGAGGTGCTTCGCGAGCCCCTGGAAAGT
GGCCATATCGTGATCGCCCGCGCCCGTGACAAGGTCGCCTTCCCTGCCCGCTTCCAGCTGGTGGCGGCCATGAACCCCTG
CCCTTGCGGGTTTCTCGGCGATCCCAGCGGCCGCTGTCGCTGCAGCCCGGAGCAGATCCAGCGCTATCGCGGCAAGCTGT
CCGGGCCGTTGCTCGACCGCATCGACCTGCACATCACCGTGGCCCGCGAGAGCACCCAGCTCGATGCGCCGCCAGACAAC
GGCGAGACCAGCGCGGCCGCCGCCAGCCGCGTCGCCGCCGCACGGGACATCCAGCTGCAGCGCCAGGGCATTGCCAATGC
CTTTCTCGACCTGCCCGGGCTGCGGACCCACTGTCACCTGGCCGACGCCGATCGCCAGTGGCTGGAGCACGCCTGCGAGC
GCCTCACCCTGTCACTGCGCTCGGCGCACCGCGTGCTGAAGGTGGCGCGAACCCTGGCCGACCTGCAGGCCGAGGAGCGC
ATCAGTCGCCAGCATCTGGCCGAAGCGCTGCAGTACCGCACCAGCCTGTAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-391)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	55.96	99.798	0.558
comM	Haemophilus influenzae Rd KW20	54.691	100	0.552
comM	Vibrio campbellii strain DS40M4	54.949	99.798	0.548
comM	Glaesserella parasuis strain SC1401	53.2	100	0.536
comM	Legionella pneumophila str. Paris	49.9	100	0.504
comM	Legionella pneumophila strain ERS1305867	49.9	100	0.504
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.535	100	0.474