Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   K7G42_RS11650 Genome accession   NZ_CP082783
Coordinates   2222273..2223481 (+) Length   402 a.a.
NCBI ID   WP_003108843.1    Uniprot ID   A0A0E2UDP0
Organism   Streptococcus parauberis strain KRS02083     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2217273..2228481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7G42_RS11625 (K7G42_11540) - 2218483..2221062 (+) 2580 WP_003108845.1 YfhO family protein -
  K7G42_RS11645 (K7G42_11560) rlmH 2221590..2222069 (-) 480 WP_037620297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  K7G42_RS11650 (K7G42_11565) htrA 2222273..2223481 (+) 1209 WP_003108843.1 S1C family serine protease Regulator
  K7G42_RS11655 (K7G42_11570) spo0J 2223557..2224330 (+) 774 WP_003102468.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 402 a.a.        Molecular weight: 42581.09 Da        Isoelectric Point: 4.9341

>NTDB_id=602229 K7G42_RS11650 WP_003108843.1 2222273..2223481(+) (htrA) [Streptococcus parauberis strain KRS02083]
MSKLKSVLKVFLYLLAGFIGGVMAFFIMNSIKPTQQSDNDNVSKTTSTSKVTYNNTTSTTKAVKKVQDAVVSVINYQKID
TASSDNYNSLFGDSSESKQTDDGLAIFSEGSGVIYKKDGKDAYIVTNNHVIDGAKRIEILLADGSKIVGTLIGSDTYSDL
AVVKVSSEKIKSVAKFADSTKINIGEVAIAIGSPLGTEYANSVTEGIVSSLSRTVTLKNEEGKTVSTNAIQTDAAINPGN
SGGALINVEGQVIGINSSKISSTNEAGGAVEGMGFAIPSNDVVKIINQLEEKGEVIRPALGISMVNLGDLSTSALSQLNV
PKEVTSGIVVATVTEDMPATDKLKQYDIITAIDGEEVKTTSDLQSALYGHDINDEVKITFYRGNEKKTVTVKLTKTTKDL
EK

Nucleotide


Download         Length: 1209 bp        

>NTDB_id=602229 K7G42_RS11650 WP_003108843.1 2222273..2223481(+) (htrA) [Streptococcus parauberis strain KRS02083]
GTGTCAAAATTAAAAAGTGTTCTGAAAGTATTTCTTTATTTGTTAGCTGGATTTATAGGGGGAGTAATGGCGTTCTTTAT
CATGAATTCTATTAAACCAACGCAACAATCAGATAATGATAATGTTTCAAAAACAACCAGCACAAGTAAAGTTACCTATA
ATAATACGACAAGTACTACTAAAGCAGTTAAGAAAGTTCAAGATGCAGTTGTTTCTGTTATCAACTATCAAAAGATAGAT
ACTGCTTCATCTGATAACTACAATAGTCTTTTTGGAGATAGTAGTGAATCTAAACAAACTGATGATGGTTTAGCAATTTT
CAGTGAAGGATCTGGAGTTATCTACAAAAAAGATGGTAAAGATGCTTATATCGTTACCAATAATCACGTTATTGATGGTG
CAAAACGGATTGAAATTTTACTTGCAGATGGCTCTAAAATCGTAGGTACACTCATCGGTTCAGATACTTATTCAGATTTA
GCAGTTGTAAAAGTGTCTTCAGAAAAAATCAAATCAGTTGCTAAATTTGCTGACTCAACAAAAATTAATATTGGAGAAGT
TGCCATTGCAATTGGTAGCCCTCTTGGAACAGAATATGCAAACTCAGTTACTGAGGGGATTGTTTCAAGTTTAAGTCGTA
CTGTTACCTTGAAAAATGAAGAAGGTAAAACCGTTTCAACAAATGCTATCCAAACGGACGCAGCTATTAACCCAGGTAAT
TCTGGAGGAGCACTTATTAATGTTGAAGGACAAGTAATTGGAATTAACTCAAGTAAAATTTCATCAACAAATGAAGCTGG
TGGAGCAGTTGAAGGTATGGGATTTGCAATTCCTTCTAATGATGTTGTCAAAATTATTAATCAACTTGAAGAAAAAGGTG
AAGTTATTAGACCAGCCCTTGGTATCTCAATGGTAAATCTTGGTGATCTTTCTACAAGTGCTTTATCGCAATTAAATGTA
CCTAAAGAAGTTACAAGTGGTATCGTCGTAGCAACTGTTACTGAAGATATGCCTGCTACTGATAAACTTAAACAATATGA
TATCATTACAGCTATTGACGGTGAAGAAGTTAAAACAACAAGTGATTTACAAAGTGCTCTTTACGGCCATGATATCAATG
ATGAGGTAAAAATCACCTTCTATCGTGGTAATGAAAAGAAAACTGTTACTGTTAAATTAACTAAAACAACTAAAGATTTA
GAAAAATAA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(110-255)

PDZ domain (PDZ_2)

(298-393)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2UDP0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.224

97.512

0.597
  htrA Streptococcus gordonii str. Challis substr. CH1

55.416

98.756

0.547
  htrA Streptococcus mitis NCTC 12261

53.431

100

0.542
  htrA Streptococcus pneumoniae Rx1

53.448

100

0.54
  htrA Streptococcus pneumoniae D39

53.448

100

0.54
  htrA Streptococcus pneumoniae R6

53.448

100

0.54
  htrA Streptococcus pneumoniae TIGR4

53.448

100

0.54