Detailed information NTG0601319

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: NE424_RS11125
• Genome accession: NZ_CP098795
• Coordinates: 2292612..2293925 (-)
• Length: 437 a.a.
• NCBI ID: WP_001289250.1
• Uniprot ID: A3M1Y8
• Organism: Acinetobacter baumannii strain VB280821
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2287612..2298925

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NE424_RS11110 (NE424_11110)	-	2289501..2291027 (+)	1527	WP_000207467.1	fumarate hydratase	-
NE424_RS11115 (NE424_11115)	-	2291169..2291723 (+)	555	WP_000155519.1	DUF2059 domain-containing protein	-
NE424_RS11120 (NE424_11120)	-	2291748..2292464 (-)	717	WP_001269731.1	DUF2846 domain-containing protein	-
NE424_RS11125 (NE424_11125)	clpX	2292612..2293925 (-)	1314	WP_001289250.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
NE424_RS11130 (NE424_11130)	clpP	2294027..2294632 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
NE424_RS11135 (NE424_11135)	tig	2294825..2296159 (-)	1335	WP_001198432.1	trigger factor	-
NE424_RS11140 (NE424_11140)	-	2296574..2298805 (+)	2232	WP_031966617.1	TonB-dependent siderophore receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48082.87 Da
• Isoelectric Point: 4.9985

>NTDB_id=601319 NE424_RS11125 WP_001289250.1 2292612..2293925(-) (clpX) [Acinetobacter baumannii strain VB280821]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKSERQPKEAVTHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=601319 NE424_RS11125 WP_001289250.1 2292612..2293925(-) (clpX) [Acinetobacter baumannii strain VB280821]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCGGCGCTTGATCAATATGTGATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGGCCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TGTTAGATGTGCCGTTTGCAATGGCAGATGCGACTACTTTGACTGAAGCGGGTTATGTTGGCGAAGACGTTGAAAATATC
GTACAAAAGCTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATCTACATTGATGAAATCGACAA
GATTACTCGTAAATCTGAAAATCCATCAATTACGCGTGATGTGTCTGGTGAAGGTGTACAACAAGCTTTGCTTAAGATGA
TTGAAGGTACTGTAGCTTCAATTCCACCACAAGGTGGACGTAAACATCCGCAGCAAGAGTTCATTCAAATTGATACCTCA
AATATTCTATTTATTTGTGGTGGTGCATTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACGGCTGATGTTAAAAACAAAGATGAAACCAAAAAACTTGCTGAATTATTCCGTCAAGTTGAGCCAACTGATTTAG
TTAAATTTGGTTTAATTCCAGAATTCATTGGCCGTTTACCAGTGATTGCAACGCTTGAAGAGCTTGATGAAGAAGCGTTA
ATGCAAATTCTGACTGAACCGAAAAATGCATTAACTCGTCAGTATCAATACCTGTTCAACATGGAAAATGTTGACCTCGT
ATTTGAAGATTCAGCTTTACGTGCAGTGGCTAAGCGTGCGCTTGAGCGTAATACCGGAGCTCGTGGCCTACGTTCGATTT
TGGAAAATGTTCTACTTGAAACGATGTATGACTTGCCAAGCCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTC
ATTAATGGTGAAGCTGAACCTGTCTACAAGTCAGAACGTCAGCCTAAAGAAGCTGTAACACATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

3D structure

• AlphaFold DB: A3M1Y8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.453	91.991	0.547
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.426	92.449	0.531