Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BAJP3042_RS05700 Genome accession   NZ_CP082243
Coordinates   1136838..1137029 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus amyloliquefaciens strain JP3042     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1131838..1142029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAJP3042_RS05670 (BAJP3042_05670) - 1132472..1133622 (+) 1151 WP_094031235.1 IS3 family transposase -
  BAJP3042_RS05675 (BAJP3042_05675) - 1133737..1133916 (+) 180 WP_003155070.1 YjzC family protein -
  BAJP3042_RS05680 (BAJP3042_05680) - 1133953..1134138 (-) 186 WP_003155069.1 YjzD family protein -
  BAJP3042_RS05685 (BAJP3042_05685) - 1134399..1135133 (+) 735 WP_080130436.1 hypothetical protein -
  BAJP3042_RS05690 (BAJP3042_05690) - 1135216..1135782 (+) 567 WP_017417444.1 hypothetical protein -
  BAJP3042_RS05695 (BAJP3042_05695) med 1135872..1136825 (+) 954 WP_060562152.1 BMP family ABC transporter substrate-binding protein Regulator
  BAJP3042_RS05700 (BAJP3042_05700) comZ 1136838..1137029 (+) 192 WP_003155061.1 ComZ family protein Regulator
  BAJP3042_RS05705 (BAJP3042_05705) - 1137058..1137276 (-) 219 WP_007409123.1 hypothetical protein -
  BAJP3042_RS05710 (BAJP3042_05710) - 1137443..1138381 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BAJP3042_RS05715 (BAJP3042_05715) fabF 1138404..1139642 (+) 1239 WP_060562153.1 beta-ketoacyl-ACP synthase II -
  BAJP3042_RS05720 (BAJP3042_05720) - 1139726..1140511 (+) 786 WP_222835844.1 DUF2268 domain-containing protein -
  BAJP3042_RS05725 (BAJP3042_05725) - 1140685..1141671 (+) 987 WP_012117279.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=600433 BAJP3042_RS05700 WP_003155061.1 1136838..1137029(+) (comZ) [Bacillus amyloliquefaciens strain JP3042]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=600433 BAJP3042_RS05700 WP_003155061.1 1136838..1137029(+) (comZ) [Bacillus amyloliquefaciens strain JP3042]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794