Detailed information NTG0599937

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: K6972_RS06965
• Genome accession: NZ_CP082203
• Coordinates: 1408964..1409905 (-)
• Length: 313 a.a.
• NCBI ID: WP_221864475.1
• Uniprot ID: -
• Organism: Streptococcus suis strain NJ3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1403964..1414905

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6972_RS06940 (K6972_06940)	prsA	1404068..1405069 (-)	1002	WP_222812404.1	peptidylprolyl isomerase PrsA	-
K6972_RS06945 (K6972_06945)	-	1405132..1405851 (-)	720	WP_043034995.1	O-methyltransferase	-
K6972_RS06950 (K6972_06950)	-	1405926..1406474 (-)	549	WP_024384845.1	DUF6630 family protein	-
K6972_RS06955 (K6972_06955)	-	1406485..1406931 (-)	447	WP_105212570.1	hypothetical protein	-
K6972_RS06960 (K6972_06960)	pepF	1406933..1408735 (-)	1803	WP_024379667.1	oligoendopeptidase F	Regulator
K6972_RS06965 (K6972_06965)	coiA	1408964..1409905 (-)	942	WP_221864475.1	competence protein CoiA	Machinery gene
K6972_RS06970 (K6972_06970)	metG	1409968..1411971 (-)	2004	WP_222812405.1	methionine--tRNA ligase	-
K6972_RS06975 (K6972_06975)	-	1412212..1412961 (-)	750	WP_222812406.1	hypothetical protein	-
K6972_RS06980 (K6972_06980)	-	1413043..1413654 (-)	612	WP_222812407.1	DUF3885 domain-containing protein	-
K6972_RS06985 (K6972_06985)	-	1413777..1414652 (+)	876	WP_222812408.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 313 a.a.
• Molecular weight: 36268.82 Da
• Isoelectric Point: 7.3979

>NTDB_id=599937 K6972_RS06965 WP_221864475.1 1408964..1409905(-) (coiA) [Streptococcus suis strain NJ3]
MLVALDEDGQVFNVLENPAPQGRFCCPGCGGLVRYKSGKVLRSHFAHVTLRDCTYFSENESAQHLSLKSCLYSWLINDEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQVRTQAYHEAGLQVLWLLGKGLWLKERLSKLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLEILRLPFAKQALSHLTCPLDRDLPRYIAQQLYYKSPNWL
ALQAESYSRGENLLTKTAEEWYPHIRLPRSAIGFAQIQKDLSPVYQDFDQYYDSIEDKQKQVLYPPIIYRKPM

Nucleotide

• Length: 942 bp

>NTDB_id=599937 K6972_RS06965 WP_221864475.1 1408964..1409905(-) (coiA) [Streptococcus suis strain NJ3]
ATGTTAGTTGCACTTGATGAAGATGGGCAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTTTTGCTGTCC
AGGTTGTGGAGGACTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCACGTAACCCTGCGGGACTGCA
CATACTTTTCCGAGAATGAGTCGGCCCAGCACCTGTCCCTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGACGAACAA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGGCAGGTCGCTGATTTATTTGTTAATAATAGTCTAGCTTTGGAAGTACA
GTGTTCCAGTCTACCCATTTCTCGTTTGCAGGTGAGGACGCAAGCCTATCATGAAGCTGGTCTTCAGGTTCTCTGGCTGT
TGGGAAAAGGCCTATGGTTAAAAGAAAGATTAAGCAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
CACCTCTGGGAATTGGATGATGAGAAAAAAGAATTGCGTCTTCGTTACCTTATTCATGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGAAATCTTGCGTCTGCCATTTGCCAAGCAAGCTTTAT
CGCATCTTACTTGCCCGTTAGATAGGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTA
GCCCTACAGGCAGAGTCTTATAGCCGAGGGGAGAATTTGCTGACAAAGACGGCAGAAGAATGGTATCCCCACATCCGTCT
ACCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAAGTCCAGTCTATCAGGATTTTGACCAGTATTACGACA
GTATTGAAGACAAGCAGAAACAGGTTCTATATCCACCTATAATTTATAGAAAACCAATGTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	53.205	99.681	0.53
coiA	Streptococcus pneumoniae TIGR4	50.962	99.681	0.508
coiA	Streptococcus pneumoniae Rx1	50.962	99.681	0.508
coiA	Streptococcus pneumoniae D39	50.962	99.681	0.508
coiA	Streptococcus pneumoniae R6	50.962	99.681	0.508
coiA	Lactococcus lactis subsp. cremoris KW2	41.562	100	0.425