Detailed information NTG0594621

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABEKA_RS06940
• Genome accession: NZ_CP080636
• Coordinates: 1167535..1168593 (+)
• Length: 352 a.a.
• NCBI ID: WP_005265529.1
• Uniprot ID: -
• Organism: Acinetobacter lwoffii strain EK30A
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1162535..1173593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEKA_RS06925 (ABEKA_1138)	mraY	1162815..1163933 (+)	1119	WP_005265518.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
ABEKA_RS06930 (ABEKA_1139)	-	1163988..1164791 (+)	804	WP_005265527.1	methyltransferase domain-containing protein	-
ABEKA_RS06935 (ABEKA_1140)	ponA	1164844..1167369 (-)	2526	WP_017397739.1	penicillin-binding protein PBP1a	-
ABEKA_RS06940 (ABEKA_1141)	pilM	1167535..1168593 (+)	1059	WP_005265529.1	pilus assembly protein PilM	Machinery gene
ABEKA_RS06945 (ABEKA_1142)	-	1168593..1169232 (+)	640	Protein_1054	PilN domain-containing protein	-
ABEKA_RS06950 (ABEKA_1144)	-	1169229..1169951 (+)	723	Protein_1055	type 4a pilus biogenesis protein PilO	-
ABEKA_RS06955 (ABEKA_1146)	-	1169951..1170479 (+)	529	Protein_1056	pilus assembly protein PilP	-
ABEKA_RS06960 (ABEKA_1148)	pilQ	1170497..1172674 (+)	2178	WP_138743431.1	type IV pilus secretin PilQ family protein	Machinery gene
ABEKA_RS06965 (ABEKA_1149)	aroK	1172711..1173247 (+)	537	WP_005265535.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39022.61 Da
• Isoelectric Point: 4.6329

>NTDB_id=594621 ABEKA_RS06940 WP_005265529.1 1167535..1168593(+) (pilM) [Acinetobacter lwoffii strain EK30A]
MRRLYRKLNKGLIGVDISSTSVKVLELSVKSGRYWVESYALVPLSENSVVEKNILNPEAVADALGRAINLGNTQSNQAAF
AIPTSMVITKIIEMDADMSDDKREVQIREDAEQYIPFPLDEASLDFEVLPDRLTNPNRVNVLLVATRIENVEARSEVLEI
SGLTPKIADVESFALENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=594621 ABEKA_RS06940 WP_005265529.1 1167535..1168593(+) (pilM) [Acinetobacter lwoffii strain EK30A]
GTGCGCAGGTTATATCGTAAACTAAATAAGGGGTTAATAGGAGTCGATATTAGTTCGACTTCTGTTAAGGTTTTAGAACT
TTCTGTAAAAAGTGGCCGTTACTGGGTAGAGAGCTATGCTTTGGTCCCATTATCGGAAAACAGTGTTGTTGAAAAAAACA
TCTTAAACCCAGAAGCAGTCGCTGATGCCCTTGGGCGTGCAATTAATTTGGGCAATACCCAGTCGAATCAGGCCGCTTTT
GCGATTCCAACTTCAATGGTCATCACCAAAATCATTGAGATGGATGCAGATATGTCGGATGACAAACGTGAGGTTCAGAT
TCGTGAAGATGCGGAACAATATATTCCTTTCCCACTCGATGAAGCGAGTCTGGACTTTGAAGTTCTGCCAGACCGTCTTA
CTAATCCAAACCGGGTCAATGTGCTATTGGTCGCTACCCGAATTGAAAATGTCGAAGCACGTTCTGAAGTTTTGGAAATT
TCTGGTCTAACGCCTAAGATTGCAGATGTAGAAAGTTTTGCGCTGGAAAATGCCTTCAAAGTATTTTCGGATACTTTGCC
GATGGGGGTCAATACGGTTGGTATCTTAGATATTGGTCATAGTATGACGACCTTGTCGGTGATGCAGAACAACAAGATTA
TTTATACCCGTGAGCAGGTGTTTGGCGGCAAGCAATTGACTCAGGAAATTCAGAATCGCTATGGATTATCCTTTGAAGAA
GCTGGACGTGCTAAAAAAACCCGTGCTTTACCGGATGATTATGATATTGAAGTGCTAGAGCCATTCCTGGATGCCGTGGT
ACAACAGGCAGCCCGTTCATTGCAATTCTTCTTTTCATCTTCTCAGTTTAATGAGATTGACCATATTTTACTGGCCGGCG
GGAATGCCAATATTCCAGGTCTGGCAAAATTATTACAACAAAAACTCGGTTACCGTGTCACGATCGCGAATCCATTTTTG
CAAATGGGCTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGACGCGTCATCACTCATGGTTGCATGCGGTTTGGC
ATTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	84.659	100	0.847
comM	Acinetobacter nosocomialis M2	84.659	100	0.847
comM	Acinetobacter baylyi ADP1	79.261	100	0.793
pilM	Legionella pneumophila strain ERS1305867	39.266	100	0.395