Detailed information NTG0059266

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: LP16_RS01840
• Genome accession: NC_021514
• Coordinates: 402087..404237 (+)
• Length: 716 a.a.
• NCBI ID: WP_016526929.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum 16
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 397087..409237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP16_RS01825 (Lp16_0378)	-	397510..398568 (+)	1059	WP_016526924.1	hypothetical protein	-
LP16_RS01830 (Lp16_0379)	-	398684..398977 (+)	294	WP_016526925.1	hypothetical protein	-
LP16_RS17015 (Lp16_0380)	-	399630..399767 (+)	138	WP_016526926.1	hypothetical protein	-
LP16_RS01835 (Lp16_0381)	-	400411..400947 (+)	537	WP_016526927.1	hypothetical protein	-
LP16_RS17205	-	401466..401681 (+)	216	WP_263971351.1	recombinase family protein	-
LP16_RS01840 (Lp16_0383)	comA	402087..404237 (+)	2151	WP_016526929.1	peptide cleavage/export ABC transporter	Regulator
LP16_RS01845 (Lp16_0384)	-	404253..405629 (+)	1377	WP_016526930.1	HlyD family secretion protein	-
LP16_RS01850 (Lp16_0385)	-	405719..406408 (+)	690	WP_003646474.1	CPBP family intramembrane glutamic endopeptidase	-
LP16_RS01855 (Lp16_0386)	-	406476..407144 (+)	669	WP_003646475.1	CPBP family intramembrane glutamic endopeptidase	-
LP16_RS01860 (Lp16_0387)	-	407231..407911 (+)	681	WP_003646476.1	CPBP family intramembrane glutamic endopeptidase	-
LP16_RS01865 (Lp16_0388)	-	408005..408691 (+)	687	WP_003646477.1	CPBP family intramembrane glutamic endopeptidase	-
LP16_RS15950	-	408807..409099 (+)	293	Protein_384	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 80040.70 Da
• Isoelectric Point: 6.5571

>NTDB_id=59266 LP16_RS01840 WP_016526929.1 402087..404237(+) (comA) [Lactiplantibacillus plantarum 16]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVNKNGDLQHFYVVVKTSKTHVMIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPNLL
KQRRLVINIVLAAALITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAELLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=59266 LP16_RS01840 WP_016526929.1 402087..404237(+) (comA) [Lactiplantibacillus plantarum 16]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTACAAGATTTACCATTG
CCATTCATTGTGCATGTTAACAAAAATGGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACGCATGTCAT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAACTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGCTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTGTTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAGATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAGCGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGAATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter (ABC_tran) (498-648)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	59.046	99.581	0.588
comA	Streptococcus pneumoniae Rx1	58.766	99.581	0.585
comA	Streptococcus pneumoniae D39	58.766	99.581	0.585
comA	Streptococcus pneumoniae R6	58.766	99.581	0.585
comA	Streptococcus pneumoniae TIGR4	58.626	99.581	0.584
comA	Streptococcus mitis SK321	58.485	99.581	0.582
comA	Streptococcus gordonii str. Challis substr. CH1	57.382	100	0.575
comA/nlmT	Streptococcus mutans UA159	54.875	100	0.55