Detailed information NTG0059265

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: LP16_RS01665
• Genome accession: NC_021514
• Coordinates: 364352..366502 (+)
• Length: 716 a.a.
• NCBI ID: WP_016526897.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum 16
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 359352..371502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP16_RS01635 (Lp16_0338)	-	359760..360935 (+)	1176	WP_016526894.1	IS256 family transposase	-
LP16_RS01640 (Lp16_0339)	-	361141..361821 (+)	681	WP_225870361.1	sensor histidine kinase	-
LP16_RS01645 (Lp16_0340)	-	361822..362565 (+)	744	WP_016526896.1	response regulator transcription factor	-
LP16_RS01650 (Lp16_0341)	-	362866..363639 (-)	774	WP_003646470.1	CPBP family intramembrane glutamic endopeptidase	-
LP16_RS01655 (Lp16_0342)	plnF	363738..363896 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
LP16_RS01660 (Lp16_0343)	-	363921..364085 (-)	165	Protein_337	bacteriocin	-
LP16_RS01665 (Lp16_0344)	comA	364352..366502 (+)	2151	WP_016526897.1	peptide cleavage/export ABC transporter	Regulator
LP16_RS01670 (Lp16_0345)	-	366518..367894 (+)	1377	WP_016526898.1	HlyD family secretion protein	-
LP16_RS15910	-	368102..368269 (+)	168	WP_302068664.1	DUF3923 family protein	-
LP16_RS01675 (Lp16_0347)	-	368396..369292 (-)	897	WP_131510832.1	IS3 family transposase	-
LP16_RS01680 (Lp16_0348)	-	369247..369771 (-)	525	WP_016526651.1	helix-turn-helix domain-containing protein	-
LP16_RS17540	-	369833..370042 (-)	210	WP_080131824.1	putative holin-like toxin	-
LP16_RS01690 (Lp16_0349)	-	370228..371142 (-)	915	WP_016526899.1	HU-CCDC81 and SPOR domain-containing protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79970.55 Da
• Isoelectric Point: 6.4629

>NTDB_id=59265 LP16_RS01665 WP_016526897.1 364352..366502(+) (comA) [Lactiplantibacillus plantarum 16]
MHWRNYVAQDDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAGLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAELLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=59265 LP16_RS01665 WP_016526897.1 364352..366502(+) (comA) [Lactiplantibacillus plantarum 16]
ATGCATTGGAGAAACTATGTTGCGCAAGATGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTCCAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTTGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGCCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGGTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAGATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAGCGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGAATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter (ABC_tran) (498-648)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.766	99.581	0.585
comA	Streptococcus pneumoniae Rx1	58.485	99.581	0.582
comA	Streptococcus pneumoniae D39	58.485	99.581	0.582
comA	Streptococcus pneumoniae R6	58.485	99.581	0.582
comA	Streptococcus pneumoniae TIGR4	58.345	99.581	0.581
comA	Streptococcus mitis SK321	58.205	99.581	0.58
comA	Streptococcus gordonii str. Challis substr. CH1	57.103	100	0.573
comA/nlmT	Streptococcus mutans UA159	54.735	100	0.549