Detailed information NTG0592203

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: K0P33_RS31260
• Genome accession: NZ_CP080330
• Coordinates: 6758642..6760138 (+)
• Length: 498 a.a.
• NCBI ID: WP_094948732.1
• Uniprot ID: -
• Organism: Pseudomonas sp. ArH3a
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 6753642..6765138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K0P33_RS31230 (K0P33_31125)	-	6754139..6754834 (+)	696	WP_094948742.1	HAD family hydrolase	-
K0P33_RS31235 (K0P33_31130)	sutA	6754962..6755291 (-)	330	WP_094948735.1	transcriptional regulator SutA	-
K0P33_RS31240 (K0P33_31135)	-	6755393..6755818 (-)	426	WP_242153459.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
K0P33_RS31245 (K0P33_31140)	-	6756030..6757370 (-)	1341	WP_094948734.1	ammonium transporter	-
K0P33_RS31250 (K0P33_31145)	glnK	6757405..6757743 (-)	339	WP_002555808.1	P-II family nitrogen regulator	-
K0P33_RS31255 (K0P33_31150)	-	6758164..6758427 (+)	264	WP_242153461.1	accessory factor UbiK family protein	-
K0P33_RS31260 (K0P33_31155)	comM	6758642..6760138 (+)	1497	WP_094948732.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
K0P33_RS31265 (K0P33_31160)	-	6760267..6760845 (-)	579	WP_094948731.1	TetR family transcriptional regulator C-terminal domain-containing protein	-
K0P33_RS31270 (K0P33_31165)	-	6760959..6761873 (+)	915	WP_094948730.1	ABC transporter six-transmembrane domain-containing protein	-
K0P33_RS31275 (K0P33_31170)	-	6761952..6763199 (-)	1248	WP_242153464.1	benzoate/H(+) symporter BenE family transporter	-
K0P33_RS31280 (K0P33_31175)	-	6763342..6764841 (+)	1500	WP_242153466.1	PLP-dependent aminotransferase family protein	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 53407.76 Da
• Isoelectric Point: 8.4243

>NTDB_id=592203 K0P33_RS31260 WP_094948732.1 6758642..6760138(+) (comM) [Pseudomonas sp. ArH3a]
MSLAIVHSRAQIGVEAPAVTVEVHMANGLPSLTLVGLPETAVKESKDRVRSAILNSALQYPARRITLNLAPADLPKDGGR
FDLAIALGILAASVQVPALMLDDVECLGELALSGEVRAVKGVLPAALAARKAGRTVIVPRANAEEACLASGLKVIAVDHL
LQVVAHLNGHVPIEPYKSDGLLYLNKPYPDLSEVQGQLAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLSE
QEALEVAAIQSVVSLAPLSHWPHRPFRQPHHSASGPALVGGGSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GHIVISRARDRVSFPARFQLVAAMNPCPCGYLGEPSGRCRCTPEQIQRYRNKLSGPLLDRIDLHLTVARETTALNPAQQP
GDNTAKASAEVAEARERQLKRQGCANAFLDLPGLRKHCQLAKADESWLESACERLTLSLRAAHRLLKVARTLADLERVEH
ITRHHLAEALQYRPAAVG

Nucleotide

• Length: 1497 bp

>NTDB_id=592203 K0P33_RS31260 WP_094948732.1 6758642..6760138(+) (comM) [Pseudomonas sp. ArH3a]
ATGTCCCTCGCCATCGTCCACAGCCGCGCCCAAATTGGCGTCGAAGCCCCTGCCGTCACCGTCGAAGTGCATATGGCCAA
TGGTCTGCCGTCCCTGACATTGGTGGGCCTGCCGGAAACCGCCGTCAAGGAAAGCAAAGACCGCGTGCGCAGCGCCATTC
TCAACTCGGCGCTGCAATATCCAGCCCGGCGCATCACCCTCAACCTCGCGCCCGCCGACCTGCCCAAGGACGGCGGGCGG
TTTGATTTGGCGATTGCCCTCGGGATTCTGGCAGCCAGTGTGCAGGTGCCGGCATTGATGCTCGATGACGTGGAATGCCT
GGGCGAGTTGGCACTGTCCGGCGAGGTGCGAGCAGTGAAAGGGGTGTTACCGGCAGCGCTGGCGGCGCGCAAGGCCGGAC
GCACCGTGATAGTGCCTCGGGCGAATGCCGAGGAGGCGTGCTTGGCGTCGGGGTTAAAGGTGATTGCGGTGGATCACTTG
CTACAGGTGGTGGCGCACTTGAATGGGCATGTGCCGATTGAGCCTTACAAGTCCGATGGCCTGCTGTACTTGAATAAACC
CTATCCAGACCTTAGCGAAGTACAAGGGCAGTTGGCGGCTAAGCGCGCGCTGCTGATTGCGGCAGCAGGCGCGCATAACC
TGCTGTTTAGCGGGCCACCTGGCACCGGCAAAACCTTGCTCGCCAGCCGCTTGCCCGGTTTGCTGCCGCCGTTGAGTGAA
CAGGAAGCCTTGGAAGTGGCGGCGATTCAGTCGGTGGTCAGCCTCGCGCCGCTGAGCCATTGGCCGCACCGCCCGTTTCG
CCAGCCGCACCATTCGGCGTCGGGGCCGGCACTGGTGGGCGGCGGGTCAAAACCGCAACCGGGGGAAATCACCCTCGCCC
ATCATGGTGTGTTGTTTCTGGATGAGTTGCCGGAGTTCGATCGCAAGGTCCTGGAAGTGCTGCGCGAACCGCTTGAGTCG
GGGCATATCGTGATTTCCCGTGCGCGCGACCGGGTGAGTTTCCCGGCACGCTTTCAACTGGTGGCCGCCATGAACCCCTG
CCCTTGCGGCTATTTGGGCGAACCCAGTGGACGCTGTCGGTGTACGCCGGAGCAGATCCAGCGCTATCGCAATAAACTCT
CAGGGCCGTTGCTGGACCGGATCGACTTGCACCTGACCGTCGCCCGGGAAACCACGGCACTTAACCCGGCCCAACAGCCT
GGCGATAACACGGCGAAGGCCTCGGCTGAGGTTGCCGAAGCCCGCGAGCGCCAACTAAAGCGCCAGGGCTGCGCCAATGC
CTTCCTTGATCTGCCCGGGCTACGCAAACATTGCCAACTGGCGAAAGCCGATGAAAGCTGGCTGGAAAGCGCCTGCGAGC
GGCTGACGTTGTCGTTGCGAGCGGCTCACCGTTTGCTCAAGGTGGCGCGCACGCTGGCCGACCTTGAGCGGGTTGAGCAC
ATCACTCGGCATCATTTGGCCGAGGCATTGCAGTACCGGCCTGCAGCGGTGGGCTAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-391)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-493)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	56.566	99.398	0.562
comM	Glaesserella parasuis strain SC1401	55.689	100	0.56
comM	Vibrio campbellii strain DS40M4	56.364	99.398	0.56
comM	Haemophilus influenzae Rd KW20	54.8	100	0.55
comM	Legionella pneumophila str. Paris	50.806	99.598	0.506
comM	Legionella pneumophila strain ERS1305867	50.806	99.598	0.506
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.322	100	0.468