Detailed information NTG0058990

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: FGCSD_RS01165
• Genome accession: NZ_AP018726
• Coordinates: 206184..206624 (+)
• Length: 146 a.a.
• NCBI ID: WP_129555187.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain Kdys0611
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 201184..211624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGCSD_RS01135 (FGCSD_0178)	-	202865..203230 (+)	366	WP_129555183.1	DUF1033 family protein	-
FGCSD_RS01140 (FGCSD_0179)	comGA	203311..204252 (+)	942	WP_129555184.1	competence type IV pilus ATPase ComGA	Machinery gene
FGCSD_RS01145 (FGCSD_0180)	comGB	204188..205219 (+)	1032	WP_129556365.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGCSD_RS01150 (FGCSD_0181)	comGC	205221..205547 (+)	327	WP_111714771.1	competence type IV pilus major pilin ComGC	Machinery gene
FGCSD_RS11205 (FGCSD_0182)	comGD	205522..205950 (+)	429	WP_129555185.1	competence type IV pilus minor pilin ComGD	Machinery gene
FGCSD_RS01160 (FGCSD_0183)	comGE	205907..206203 (+)	297	WP_129555186.1	competence type IV pilus minor pilin ComGE	Machinery gene
FGCSD_RS01165 (FGCSD_0184)	comGF	206184..206624 (+)	441	WP_129555187.1	competence type IV pilus minor pilin ComGF	Machinery gene
FGCSD_RS01170 (FGCSD_0185)	comGG	206602..206976 (+)	375	WP_129555188.1	competence type IV pilus minor pilin ComGG	-
FGCSD_RS01175 (FGCSD_0186)	comGH	207039..207992 (+)	954	WP_129555189.1	class I SAM-dependent methyltransferase	Machinery gene
FGCSD_RS01180 (FGCSD_0187)	-	208051..209247 (+)	1197	WP_129555190.1	acetate kinase	-
FGCSD_RS01185 (FGCSD_0188)	-	209553..209760 (+)	208	Protein_180	helix-turn-helix transcriptional regulator	-
FGCSD_RS01190 (FGCSD_0189)	-	209863..210543 (+)	681	WP_129555191.1	type II CAAX endopeptidase family protein	-
FGCSD_RS01195 (FGCSD_0190)	-	210561..210998 (+)	438	WP_129555192.1	hypothetical protein	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 17012.54 Da
• Isoelectric Point: 10.5665

>NTDB_id=58990 FGCSD_RS01165 WP_129555187.1 206184..206624(+) (comGF) [Streptococcus dysgalactiae strain Kdys0611]
MKKRTGRVQAFTFLEALIALLVISGSLLVYQGLTKTLFSHSRYLTNHDQDHWLLFSQQLREELSGARFHKVENNKLYIEK
GKKKLVLGQFKSHDFRKSAGNGQGYQPMLFGLSHSHIQAEQSRIRITLHWKSGLERTFYYAFQDQP

Nucleotide

• Length: 441 bp

>NTDB_id=58990 FGCSD_RS01165 WP_129555187.1 206184..206624(+) (comGF) [Streptococcus dysgalactiae strain Kdys0611]
TTGAAAAAAAGGACAGGTAGGGTCCAAGCATTTACTTTTTTAGAGGCTTTAATTGCCTTGCTGGTGATATCAGGTTCTCT
TCTAGTGTATCAAGGATTGACCAAAACACTCTTTAGCCACAGTCGCTACCTTACCAACCACGATCAAGACCATTGGCTTT
TGTTCTCCCAGCAGTTACGAGAAGAGTTAAGTGGAGCGCGATTTCACAAAGTAGAGAACAATAAATTATATATCGAAAAA
GGCAAGAAAAAACTAGTTTTAGGACAATTTAAAAGCCATGACTTTCGAAAATCGGCAGGCAATGGACAAGGTTATCAACC
CATGCTGTTTGGCTTGTCTCATAGTCATATACAAGCAGAGCAGTCTCGTATTCGGATTACCCTTCACTGGAAAAGTGGAC
TAGAAAGGACCTTCTACTATGCATTTCAAGACCAACCTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (40-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.482	95.205	0.452
comGF	Streptococcus mutans UA140	46.763	95.205	0.445
comGF	Lactococcus lactis subsp. cremoris KW2	47.101	94.521	0.445
comGF/cglF	Streptococcus mitis SK321	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae R6	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae TIGR4	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae D39	43.796	93.836	0.411
comGF/cglF	Streptococcus mitis NCTC 12261	43.796	93.836	0.411
comGF/cglF	Streptococcus pneumoniae Rx1	43.796	93.836	0.411