Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | FGCSD_RS01160 | Genome accession | NZ_AP018726 |
| Coordinates | 205907..206203 (+) | Length | 98 a.a. |
| NCBI ID | WP_129555186.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae strain Kdys0611 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 200907..211203
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGCSD_RS01135 (FGCSD_0178) | - | 202865..203230 (+) | 366 | WP_129555183.1 | DUF1033 family protein | - |
| FGCSD_RS01140 (FGCSD_0179) | comGA | 203311..204252 (+) | 942 | WP_129555184.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGCSD_RS01145 (FGCSD_0180) | comGB | 204188..205219 (+) | 1032 | WP_129556365.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FGCSD_RS01150 (FGCSD_0181) | comGC | 205221..205547 (+) | 327 | WP_111714771.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGCSD_RS11205 (FGCSD_0182) | comGD | 205522..205950 (+) | 429 | WP_129555185.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| FGCSD_RS01160 (FGCSD_0183) | comGE | 205907..206203 (+) | 297 | WP_129555186.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| FGCSD_RS01165 (FGCSD_0184) | comGF | 206184..206624 (+) | 441 | WP_129555187.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| FGCSD_RS01170 (FGCSD_0185) | comGG | 206602..206976 (+) | 375 | WP_129555188.1 | competence type IV pilus minor pilin ComGG | - |
| FGCSD_RS01175 (FGCSD_0186) | comGH | 207039..207992 (+) | 954 | WP_129555189.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FGCSD_RS01180 (FGCSD_0187) | - | 208051..209247 (+) | 1197 | WP_129555190.1 | acetate kinase | - |
| FGCSD_RS01185 (FGCSD_0188) | - | 209553..209760 (+) | 208 | Protein_180 | helix-turn-helix transcriptional regulator | - |
| FGCSD_RS01190 (FGCSD_0189) | - | 209863..210543 (+) | 681 | WP_129555191.1 | type II CAAX endopeptidase family protein | - |
| FGCSD_RS01195 (FGCSD_0190) | - | 210561..210998 (+) | 438 | WP_129555192.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11152.15 Da Isoelectric Point: 10.1376
>NTDB_id=58989 FGCSD_RS01160 WP_129555186.1 205907..206203(+) (comGE) [Streptococcus dysgalactiae strain Kdys0611]
MEIIKKQVKAYIALESVMATGVLVAIVILVLTSLKQSQTRLTYYRNQQEKLNLALMAVQTGQASLNMNDCRLTVSRTEKT
LIVRDQEGEVIRIEKKDR
MEIIKKQVKAYIALESVMATGVLVAIVILVLTSLKQSQTRLTYYRNQQEKLNLALMAVQTGQASLNMNDCRLTVSRTEKT
LIVRDQEGEVIRIEKKDR
Nucleotide
Download Length: 297 bp
>NTDB_id=58989 FGCSD_RS01160 WP_129555186.1 205907..206203(+) (comGE) [Streptococcus dysgalactiae strain Kdys0611]
GTGGAAATTATCAAAAAACAAGTCAAAGCTTACATCGCTCTTGAGAGTGTCATGGCAACAGGCGTCCTCGTGGCTATTGT
CATACTGGTTCTAACGAGTTTGAAGCAAAGTCAGACAAGGTTGACATATTATCGCAACCAACAAGAAAAGCTCAACCTAG
CTCTGATGGCAGTACAAACTGGTCAAGCGTCTCTCAATATGAATGATTGTCGTCTGACGGTTTCACGCACAGAAAAAACA
CTTATCGTTAGGGATCAGGAAGGAGAGGTTATTAGAATTGAAAAAAAGGACAGGTAG
GTGGAAATTATCAAAAAACAAGTCAAAGCTTACATCGCTCTTGAGAGTGTCATGGCAACAGGCGTCCTCGTGGCTATTGT
CATACTGGTTCTAACGAGTTTGAAGCAAAGTCAGACAAGGTTGACATATTATCGCAACCAACAAGAAAAGCTCAACCTAG
CTCTGATGGCAGTACAAACTGGTCAAGCGTCTCTCAATATGAATGATTGTCGTCTGACGGTTTCACGCACAGAAAAAACA
CTTATCGTTAGGGATCAGGAAGGAGAGGTTATTAGAATTGAAAAAAAGGACAGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Streptococcus mutans UA140 |
46.809 |
95.918 |
0.449 |
| comGE | Streptococcus mutans UA159 |
46.809 |
95.918 |
0.449 |