Detailed information NTG0589099

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KYK33_RS00560
• Genome accession: NZ_CP079742
• Coordinates: 128060..129574 (-)
• Length: 504 a.a.
• NCBI ID: WP_224431704.1
• Uniprot ID: -
• Organism: Aeromonas rivuli strain 20-VB00005
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 123060..134574

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KYK33_RS00530 (KYK33_00525)	pncB	123065..124243 (-)	1179	WP_224432911.1	nicotinate phosphoribosyltransferase	-
KYK33_RS00535 (KYK33_00530)	-	124290..124916 (-)	627	WP_224431702.1	nicotinamidase	-
KYK33_RS00540 (KYK33_00535)	-	124991..125641 (+)	651	WP_042039853.1	NrtR DNA-binding winged helix domain-containing protein	-
KYK33_RS00545 (KYK33_00540)	-	125665..126138 (+)	474	WP_224432912.1	DUF523 domain-containing protein	-
KYK33_RS00550 (KYK33_00545)	-	126081..127025 (-)	945	WP_224431703.1	acyltransferase	-
KYK33_RS00555 (KYK33_00550)	-	127019..127924 (-)	906	WP_042039858.1	acyltransferase	-
KYK33_RS00560 (KYK33_00555)	comM	128060..129574 (-)	1515	WP_224431704.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KYK33_RS00565 (KYK33_00560)	ilvG	129960..131606 (+)	1647	WP_042039860.1	acetolactate synthase 2 catalytic subunit	-
KYK33_RS00570 (KYK33_00565)	ilvM	131603..131902 (+)	300	WP_396021372.1	acetolactate synthase 2 small subunit	-
KYK33_RS00575 (KYK33_00570)	-	131915..132847 (+)	933	WP_224431705.1	branched-chain amino acid transaminase	-

Sequence

Protein

• Length: 504 a.a.
• Molecular weight: 54424.60 Da
• Isoelectric Point: 8.8983

>NTDB_id=589099 KYK33_RS00560 WP_224431704.1 128060..129574(-) (comM) [Aeromonas rivuli strain 20-VB00005]
MSLAVVYSRASLGIQAPQVTVEVHLSNGLPAFNIVGLPETSVKESRDRVRSALLNGNFEFPAKRITVNLAPADLPKEGGR
FDLAIALGILAASKQIPATYLLDHEFLGELALTGEIRPVLGVLPAVLACRDAGRTLLVPTANGVEAALIQNAKVRCAHQL
LAVTAWLAGQYELPLPLSQPDSQRPDVADLQDVIGQSQAKRALEIAAAGCHNLLFIGPPGTGKSMLASRLPGILPPLSEE
EAQQTAAIHSIGGLTPRQGHWHQRPYRTPHHSASAVALVGGGSHPRPGEISLAHNGVLFLDELPEFERKVLDALREPLET
GHITISRAARQVDFPARFQLIGAMNPSPCGHFGDGLSRASPDQILRYLGRLSGPFLDRFDLTVEVPLLPKGSLTGKAQRG
EPSAQIRDRVLGARDRMLARSGKLNNLLDSREIEDVCRLSPQDADFLETAIQRLGLSIRAWHRILRVSRTLADLAGKTQI
EKAHLVEALGYRAMDRLLSRLRGG

Nucleotide

• Length: 1515 bp

>NTDB_id=589099 KYK33_RS00560 WP_224431704.1 128060..129574(-) (comM) [Aeromonas rivuli strain 20-VB00005]
ATGTCATTAGCTGTGGTTTATAGTCGTGCCAGCCTGGGGATCCAGGCACCGCAAGTGACGGTGGAAGTTCACCTCTCCAA
TGGCCTGCCCGCCTTCAATATCGTGGGCCTGCCCGAGACCTCGGTGAAGGAGTCGCGGGACAGGGTGCGCAGCGCCCTGC
TCAACGGCAACTTCGAGTTCCCAGCCAAGCGCATCACCGTCAATCTGGCCCCGGCAGACTTGCCCAAGGAAGGGGGTCGC
TTCGACCTGGCCATCGCTCTCGGCATTCTCGCCGCATCCAAGCAGATACCGGCAACATACCTGCTCGATCATGAGTTTTT
GGGGGAGTTGGCCCTGACCGGCGAGATCCGGCCCGTGCTCGGCGTACTGCCCGCCGTGCTCGCCTGCCGCGATGCCGGTC
GTACCCTGCTGGTGCCCACCGCCAATGGGGTCGAGGCCGCCCTCATCCAGAATGCCAAGGTGCGCTGTGCCCACCAGCTG
CTGGCGGTGACCGCCTGGCTCGCCGGCCAATATGAGTTGCCGCTGCCACTCTCTCAACCCGACAGCCAGAGGCCCGATGT
GGCGGATCTGCAGGATGTGATAGGTCAATCCCAGGCCAAACGCGCGCTGGAGATAGCCGCGGCTGGCTGCCACAATCTGC
TGTTCATCGGCCCGCCTGGCACCGGCAAGAGCATGCTGGCCAGTCGTCTGCCCGGCATACTGCCGCCGCTCAGCGAAGAG
GAGGCCCAGCAGACCGCCGCTATTCACTCCATCGGCGGTCTGACCCCGAGACAGGGTCACTGGCACCAGAGACCCTATCG
CACCCCCCATCACAGCGCCTCGGCGGTGGCCCTGGTCGGTGGTGGCAGCCACCCCAGGCCAGGTGAGATCTCCCTGGCCC
ACAATGGTGTGCTCTTCCTGGATGAACTGCCCGAGTTCGAGCGCAAAGTGCTCGATGCCCTGCGCGAGCCGCTGGAGACG
GGCCATATCACCATCAGCCGGGCCGCCCGCCAGGTGGATTTTCCCGCCCGCTTCCAGCTGATTGGCGCCATGAACCCCAG
CCCCTGCGGCCACTTCGGCGACGGTCTGAGCCGCGCCAGTCCGGATCAGATACTGCGCTATCTCGGCAGACTCTCCGGTC
CCTTCCTCGACCGCTTCGATCTCACCGTGGAGGTGCCGCTCTTGCCCAAGGGCAGCCTGACCGGCAAGGCCCAGCGCGGC
GAACCCAGTGCCCAGATCCGCGACAGGGTACTGGGGGCGCGCGATCGGATGCTGGCTCGCAGCGGCAAGCTGAATAACCT
GCTCGATAGCCGGGAAATCGAAGACGTTTGCCGGTTATCACCACAAGATGCCGATTTTTTGGAGACAGCCATCCAGCGAC
TCGGCCTCAGCATCCGCGCCTGGCACCGGATACTGCGGGTGTCCCGCACCCTGGCCGATCTCGCTGGCAAGACCCAGATC
GAGAAGGCACATCTGGTCGAGGCGCTGGGGTATCGCGCCATGGACAGGCTGCTGAGCAGACTGCGCGGCGGCTAG

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	64.94	99.603	0.647
comM	Vibrio campbellii strain DS40M4	63.347	99.603	0.631
comM	Glaesserella parasuis strain SC1401	61.811	100	0.623
comM	Haemophilus influenzae Rd KW20	61.462	100	0.617
comM	Legionella pneumophila str. Paris	51.008	98.413	0.502
comM	Legionella pneumophila strain ERS1305867	51.008	98.413	0.502
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.059	100	0.452