Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KX728_RS09275 Genome accession   NZ_CP079724
Coordinates   1919479..1920237 (+) Length   252 a.a.
NCBI ID   WP_125413781.1    Uniprot ID   -
Organism   Streptococcus oralis strain 34     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1914479..1925237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KX728_RS09245 (KX728_09240) comE 1915067..1915819 (-) 753 WP_215804201.1 LytTR family DNA-binding domain-containing protein Regulator
  KX728_RS09250 (KX728_09245) comD 1915816..1917135 (-) 1320 WP_215804200.1 GHKL domain-containing protein Regulator
  KX728_RS09255 (KX728_09250) comC/comC2 1917156..1917281 (-) 126 WP_215804199.1 competence-stimulating peptide ComC Regulator
  KX728_RS09265 (KX728_09260) rlmH 1917563..1918042 (-) 480 WP_000694219.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KX728_RS09270 (KX728_09265) htrA 1918228..1919421 (+) 1194 WP_215804198.1 S1C family serine protease Regulator
  KX728_RS09275 (KX728_09270) spo0J 1919479..1920237 (+) 759 WP_125413781.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29083.56 Da        Isoelectric Point: 8.2829

>NTDB_id=589014 KX728_RS09275 WP_125413781.1 1919479..1920237(+) (spo0J) [Streptococcus oralis strain 34]
MEKFEMISISEIQKNPYQPRKEFDTEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILTEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTEKKHKKQKKSDSFIKDEEDKLKKILGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=589014 KX728_RS09275 WP_125413781.1 1919479..1920237(+) (spo0J) [Streptococcus oralis strain 34]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGAAAAGAATTTGATACAGAAAA
ACTAAAGGAATTAGCTCAGTCAATCAAAGAAAATGGGCTCATCCAGCCAATCATTGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTGGCTGGTCTGACCTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATCCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTATGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAAATAGCAGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTACTTTCCCTACCAGAATATATCTTAACTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTAGTTGGTTTAGACAAAGAGCAGCAAGACTATTTCTTCCAACTAATCAAAAATGAAGATATTTCTGTGAGAAA
GTTAGAAGCACTTCTTACAGAGAAAAAACACAAGAAGCAGAAAAAAAGTGATTCTTTCATCAAAGATGAAGAAGATAAAT
TAAAAAAAATACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(145-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.988

100

0.512