Detailed information NTG0587552

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KVH38_RS13730
• Genome accession: NZ_CP078509
• Coordinates: 2909878..2910942 (-)
• Length: 354 a.a.
• NCBI ID: WP_045159370.1
• Uniprot ID: A0AA42PD57
• Organism: Stutzerimonas stutzeri strain S116
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2904878..2915942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KVH38_RS22490	aroK	2905454..2905999 (-)	546	WP_017244294.1	shikimate kinase AroK	-
KVH38_RS13710 (KVH38_13710)	pilQ	2906006..2908105 (-)	2100	WP_041755270.1	type IV pilus secretin PilQ	Machinery gene
KVH38_RS13715 (KVH38_13715)	pilP	2908159..2908686 (-)	528	WP_011911789.1	type 4a pilus biogenesis lipoprotein PilP	-
KVH38_RS13720 (KVH38_13720)	pilO	2908683..2909309 (-)	627	WP_017244292.1	type 4a pilus biogenesis protein PilO	-
KVH38_RS13725 (KVH38_13725)	pilN	2909306..2909878 (-)	573	WP_218650800.1	type 4a pilus biogenesis protein PilN	-
KVH38_RS13730 (KVH38_13730)	comM	2909878..2910942 (-)	1065	WP_045159370.1	pilus assembly protein PilM	Machinery gene
KVH38_RS13735 (KVH38_13735)	-	2911122..2913545 (+)	2424	WP_218650801.1	penicillin-binding protein 1A	-
KVH38_RS13740 (KVH38_13740)	-	2913611..2914879 (-)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
KVH38_RS13745 (KVH38_13745)	-	2915021..2915815 (-)	795	WP_135265912.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37730.25 Da
• Isoelectric Point: 4.6880

>NTDB_id=587552 KVH38_RS13730 WP_045159370.1 2909878..2910942(-) (comM) [Stutzerimonas stutzeri strain S116]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTGHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=587552 KVH38_RS13730 WP_045159370.1 2909878..2910942(-) (comM) [Stutzerimonas stutzeri strain S116]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCGCCGAATGCCGTCGTCGAAAAGAACA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACAAAGATGATTGAAATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAACCAGCT
CAAGATCGAGGCGGATCAGTACATCCCCTATCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAAGTTCTCCTCGCCGCTTGCCGTAAAGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCCGGACTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTACGGATTGCTCGCTTCACAGTTGGG
TACAGGGCACGGCGAGCTGACCGTTGCCGTCGTCGACATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAACAGCTGTTCGGTGGTCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCTGGCCTTGCCAAGAAGCAAGGCGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATCCTGCTCG
CGGGTGGGACGGCCTCCATTCCGGGTCTCGATCACATGATCCAGCAAAAGATCGGAACGCAAACTCTAGTGGCTAATCCC
TTCGCCGATATGGCATTGAGCGGCAAGGTGAACGCCGGGGCGCTGGCCAGCGATGCGCCTGCGTTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463