Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   TL13_RS08305 Genome accession   NC_021213
Coordinates   1675834..1676556 (-) Length   240 a.a.
NCBI ID   WP_002938171.1    Uniprot ID   A0A116M1G6
Organism   Streptococcus suis TL13     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 1670834..1681556
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TL13_RS08285 (TL13_1660) - 1670836..1672059 (-) 1224 WP_015647356.1 cysteine desulfurase -
  TL13_RS08290 (TL13_1661) sufD 1672063..1673325 (-) 1263 WP_015647357.1 Fe-S cluster assembly protein SufD -
  TL13_RS08295 (TL13_1662) sufC 1673342..1674115 (-) 774 WP_002938165.1 Fe-S cluster assembly ATPase SufC -
  TL13_RS08300 (TL13_1664) - 1674665..1675837 (-) 1173 WP_002938168.1 glycosyltransferase family 4 protein -
  TL13_RS08305 (TL13_1665) mecA 1675834..1676556 (-) 723 WP_002938171.1 adaptor protein MecA Regulator
  TL13_RS08310 (TL13_1666) - 1676684..1677520 (-) 837 WP_015647359.1 undecaprenyl-diphosphate phosphatase -
  TL13_RS08315 (TL13_1667) - 1677647..1679212 (+) 1566 WP_015647360.1 ABC transporter substrate-binding protein/permease -
  TL13_RS08320 (TL13_1668) - 1679205..1679948 (+) 744 WP_012775335.1 amino acid ABC transporter ATP-binding protein -
  TL13_RS08325 (TL13_1669) - 1680072..1680281 (-) 210 WP_009910800.1 hypothetical protein -
  TL13_RS08330 (TL13_1670) - 1680367..1681269 (-) 903 WP_002942264.1 SPFH domain-containing protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27973.51 Da        Isoelectric Point: 4.0497

>NTDB_id=58644 TL13_RS08305 WP_002938171.1 1675834..1676556(-) (mecA) [Streptococcus suis TL13]
MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTVLDELDLPMTFRESGMLSFRVTPKPDRVDIFVTKSDL
DQSLNFDEFTDLSELGDVASMTPDEFFKSLEQTVREKSAPDATAVRHLEEVEQEEEADEEEQERYIYYILEFPTIEDLFT
FVGTVDYPVEESELYKMDGHYYLTVLINVENRSKQYPGYILSRMLEFTNDTKLTRPALQEHGTLMLPLAAIEELRKVPTV

Nucleotide


Download         Length: 723 bp        

>NTDB_id=58644 TL13_RS08305 WP_002938171.1 1675834..1676556(-) (mecA) [Streptococcus suis TL13]
ATGAAAGTAAAGCAAATTAGTGATTCGACCTTGAAAATCACTATAAAATTAGATGATTTGGAAGAGAGAGGAATGGAACT
TTCGGACTTTCTCATTCCGCAAGAAAAGACAGAGGAGTTCTTCTATACTGTTTTGGATGAATTGGATTTACCAATGACTT
TCCGAGAAAGCGGTATGCTGAGTTTTCGTGTGACTCCGAAGCCAGATCGGGTGGACATCTTTGTTACCAAGTCTGATTTG
GATCAGAGCTTGAATTTCGATGAATTTACAGATTTGTCGGAACTTGGTGATGTCGCAAGTATGACTCCAGATGAGTTTTT
CAAGAGTTTGGAGCAAACCGTTCGTGAGAAAAGCGCACCGGATGCAACAGCCGTTCGTCATTTGGAAGAGGTAGAGCAAG
AGGAAGAAGCAGATGAAGAGGAGCAGGAGCGCTATATTTACTATATTTTGGAATTTCCAACGATAGAGGATCTGTTTACT
TTTGTTGGTACGGTTGATTATCCAGTAGAAGAATCGGAATTATATAAAATGGATGGTCATTACTACTTGACCGTTCTTAT
CAATGTAGAAAATCGTTCTAAGCAGTATCCAGGCTACATTCTCTCAAGAATGTTGGAATTTACCAATGATACTAAGTTGA
CCAGACCTGCTTTACAAGAACACGGAACTTTGATGCTTCCGCTTGCGGCAATCGAGGAGCTTAGGAAGGTTCCGACAGTA
TGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-234)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A116M1G6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

51.639

100

0.525
  mecA Streptococcus pneumoniae D39

51.639

100

0.525
  mecA Streptococcus pneumoniae R6

51.639

100

0.525
  mecA Streptococcus pneumoniae TIGR4

51.639

100

0.525
  mecA Streptococcus mutans UA159

50

100

0.508
  mecA Streptococcus thermophilus LMD-9

47.5

100

0.475
  mecA Streptococcus thermophilus LMG 18311

47.083

100

0.471

Multiple sequence alignment