Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   EGT69_RS01095 Genome accession   NZ_CP078018
Coordinates   232997..234124 (-) Length   375 a.a.
NCBI ID   WP_004905514.1    Uniprot ID   -
Organism   Acinetobacter junii strain AJ_351     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 227997..239124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT69_RS01070 (EGT69_001070) - 228180..228953 (-) 774 WP_039048133.1 helix-turn-helix transcriptional regulator -
  EGT69_RS01075 (EGT69_001075) - 228943..230189 (-) 1247 Protein_207 MFS transporter -
  EGT69_RS01080 (EGT69_001080) - 230306..230971 (+) 666 WP_171065654.1 TetR/AcrR family transcriptional regulator -
  EGT69_RS01085 (EGT69_001085) - 231075..231995 (+) 921 WP_125297937.1 DMT family transporter -
  EGT69_RS01090 (EGT69_001090) - 232390..232959 (-) 570 WP_125297938.1 Sua5/YciO/YrdC/YwlC family protein -
  EGT69_RS01095 (EGT69_001095) dprA 232997..234124 (-) 1128 WP_004905514.1 DNA-processing protein DprA Machinery gene
  EGT69_RS01100 (EGT69_001100) tsaP 234134..235285 (-) 1152 WP_125297939.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  EGT69_RS01105 (EGT69_001105) def 235406..235936 (+) 531 WP_004905508.1 peptide deformylase -
  EGT69_RS01110 (EGT69_001110) - 235958..236395 (+) 438 WP_039048136.1 DUF2946 family protein -
  EGT69_RS01115 (EGT69_001115) - 236469..238604 (+) 2136 WP_125297940.1 TonB-dependent copper receptor -

Sequence


Protein


Download         Length: 375 a.a.        Molecular weight: 42307.26 Da        Isoelectric Point: 7.1137

>NTDB_id=586359 EGT69_RS01095 WP_004905514.1 232997..234124(-) (dprA) [Acinetobacter junii strain AJ_351]
MLNQLSPHHYHTVLVWYLVQHSLSSFHKILKHFGSCEQATQSHRFSEWYQLGLHANHLKRLEEFQSTQGQKQFEQIVQLI
LKHCDFIVTPHDIDYPKQLMPYADHPPILFGQGHLQALLQPQIALVGSRKPSPHGRQVAYDFAYYLSEKGFYITSGLAHG
IDEAAHRGGLAHHRSIAVTGTGLDTVYPTQNKPLAQQIAQSGAIITEFLPTTLPLQQHFPRRNRIVSGLSLGVLVVEAAL
KSGSLITANEAANQGKMVFAIPGHIYSEYHQGCHQLIREGAVLVDHPEQIIEDLALPTHWQTQQHTKDAVEQHSTLPPHL
ISLYQNLDWIGQDLDLLSQRYPAPISEITSQLMELELLGLCIQQGGRYLRCRPIH

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=586359 EGT69_RS01095 WP_004905514.1 232997..234124(-) (dprA) [Acinetobacter junii strain AJ_351]
ATGTTGAATCAATTATCACCCCACCACTACCATACCGTGTTGGTGTGGTATTTGGTTCAACATTCCCTATCCAGCTTTCA
CAAAATTCTGAAACATTTTGGGAGTTGTGAACAAGCAACACAAAGCCACCGATTCTCTGAGTGGTATCAACTCGGTTTAC
ATGCAAACCATCTAAAACGCTTAGAAGAATTTCAAAGCACACAAGGTCAAAAACAATTTGAACAGATAGTTCAACTGATT
TTGAAGCACTGTGACTTTATCGTGACGCCACACGATATTGACTATCCCAAACAACTCATGCCTTATGCAGATCATCCCCC
CATATTATTTGGTCAAGGTCATCTTCAGGCTTTACTGCAACCGCAAATTGCATTAGTGGGGAGCCGCAAACCTAGTCCAC
ATGGTCGCCAAGTGGCTTATGATTTTGCTTATTACCTTAGTGAGAAAGGATTTTATATTACCAGTGGTCTTGCACATGGG
ATTGATGAAGCTGCTCATCGCGGTGGCTTAGCACATCATCGAAGTATCGCTGTCACAGGTACTGGGTTAGATACCGTTTA
TCCCACTCAAAATAAACCATTGGCACAACAAATTGCTCAATCAGGTGCCATCATCACAGAGTTTCTTCCTACGACACTCC
CATTACAACAACATTTTCCACGACGAAATCGGATTGTTAGTGGCTTAAGTTTAGGTGTCTTAGTGGTTGAAGCAGCACTA
AAAAGTGGATCTTTGATTACGGCGAATGAAGCAGCCAATCAAGGTAAAATGGTATTTGCTATCCCTGGTCATATTTACAG
TGAATACCATCAAGGCTGTCATCAACTTATTCGTGAAGGGGCTGTTTTGGTCGATCATCCTGAACAGATTATTGAAGATT
TAGCATTACCTACACATTGGCAGACCCAACAACACACTAAAGATGCTGTAGAACAGCACTCAACACTTCCACCACATTTG
ATTAGCTTGTATCAGAATTTAGATTGGATTGGACAGGATTTAGATTTACTCAGCCAACGCTATCCAGCACCGATCTCTGA
AATCACATCTCAATTAATGGAATTAGAGTTACTAGGTTTGTGCATACAACAAGGTGGTCGCTATTTACGTTGTCGTCCAA
TCCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

73.067

100

0.731

  dprA Acinetobacter baumannii strain A118

72

100

0.72

  dprA Acinetobacter baylyi ADP1

69.474

100

0.704

  dprA Vibrio cholerae strain A1552

42.655

94.4

0.403