Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   I872_RS10645 Genome accession   NC_021175
Coordinates   2141031..2141792 (+) Length   253 a.a.
NCBI ID   WP_015606091.1    Uniprot ID   A0A512ABV3
Organism   Streptococcus cristatus AS 1.3089     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2136031..2146792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I872_RS10615 (I872_10660) comE/comE2 2136577..2137320 (-) 744 WP_005591384.1 competence system response regulator transcription factor ComE Regulator
  I872_RS10620 (I872_10665) comD/comD1 2137317..2138660 (-) 1344 WP_172456456.1 GHKL domain-containing protein Regulator
  I872_RS10625 comC 2138686..2138814 (-) 129 WP_041826850.1 competence protein Regulator
  I872_RS10635 (I872_10670) rlmH 2139108..2139587 (-) 480 WP_015606089.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I872_RS10640 (I872_10675) htrA 2139790..2140968 (+) 1179 WP_015606090.1 S1C family serine protease Regulator
  I872_RS10645 (I872_10680) spo0J 2141031..2141792 (+) 762 WP_015606091.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 253 a.a.        Molecular weight: 29346.18 Da        Isoelectric Point: 9.5448

>NTDB_id=58494 I872_RS10645 WP_015606091.1 2141031..2141792(+) (spo0J) [Streptococcus cristatus AS 1.3089]
MENYQYIPLKDIRTNPYQPRKSFSQEKINELAASIKENGIIQPIILRQSSLFGYEILAGERRFRAAKIAGLEKIPALIKD
LSDDDMMKQAIIENLQREDLNPIEEAESYQHLIDKGLTHEEIAKIMGKSRPYISNLVRLLQLPAFMMDAVKEEMISQGHA
RLLIPLKKEEQVFWLDKIIQDNLSVRALELSLQKTRKSKTKKNKEIFAHSEEEKLKKILGLNVTIHLKNPSKGKIIIPFE
NEEEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=58494 I872_RS10645 WP_015606091.1 2141031..2141792(+) (spo0J) [Streptococcus cristatus AS 1.3089]
ATGGAAAATTATCAATACATACCACTAAAAGACATTCGAACCAATCCTTATCAGCCTAGAAAGAGTTTTTCTCAAGAAAA
AATAAATGAATTGGCAGCTTCTATTAAAGAGAATGGAATTATCCAGCCCATTATTTTGAGACAATCTTCCTTATTTGGTT
ACGAAATTTTAGCAGGTGAAAGACGATTCCGAGCTGCTAAGATTGCTGGCTTAGAAAAGATTCCTGCCCTCATTAAAGAC
CTATCTGACGATGACATGATGAAGCAAGCCATCATCGAGAATTTGCAAAGAGAAGACCTCAATCCGATTGAAGAAGCAGA
ATCCTATCAGCATCTGATTGATAAAGGATTGACCCATGAAGAAATTGCAAAAATCATGGGAAAATCTCGGCCTTACATCA
GTAATCTTGTCCGCTTGTTACAGCTGCCAGCTTTTATGATGGACGCTGTCAAAGAAGAAATGATTTCGCAAGGGCATGCT
CGTCTCCTCATTCCACTCAAAAAGGAAGAACAAGTCTTTTGGCTGGACAAAATCATTCAAGATAATTTATCCGTTCGTGC
TCTTGAACTTTCATTACAAAAGACCAGAAAGTCAAAGACTAAGAAGAACAAAGAAATTTTTGCCCATTCAGAAGAAGAAA
AATTGAAAAAAATCCTTGGCCTCAATGTCACTATTCACTTAAAAAATCCTTCAAAAGGAAAGATCATTATCCCTTTTGAA
AATGAGGAAGAGTACCAAAGAATTATAAACAGCCTGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A512ABV3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.569

100

0.526


Multiple sequence alignment