Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   I872_RS06135 Genome accession   NC_021175
Coordinates   1227858..1229354 (-) Length   498 a.a.
NCBI ID   WP_015605271.1    Uniprot ID   A0A512AC55
Organism   Streptococcus cristatus AS 1.3089     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1222858..1234354
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I872_RS06120 (I872_06105) amiF 1224919..1225845 (-) 927 WP_015605268.1 ATP-binding cassette domain-containing protein Regulator
  I872_RS06125 (I872_06110) amiE 1225856..1226923 (-) 1068 WP_015605269.1 ABC transporter ATP-binding protein Regulator
  I872_RS06130 (I872_06115) amiD 1226932..1227858 (-) 927 WP_015605270.1 oligopeptide ABC transporter permease OppC Regulator
  I872_RS06135 (I872_06120) amiC 1227858..1229354 (-) 1497 WP_015605271.1 ABC transporter permease Regulator
  I872_RS06140 (I872_06125) amiA3 1229420..1231396 (-) 1977 WP_015605272.1 peptide ABC transporter substrate-binding protein Regulator
  I872_RS06145 (I872_06130) - 1231537..1233291 (-) 1755 WP_015605273.1 glycerophosphoryl diester phosphodiesterase membrane domain-containing protein -
  I872_RS06150 (I872_06135) - 1233565..1234059 (-) 495 WP_015605274.1 DUF536 domain-containing protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 56146.03 Da        Isoelectric Point: 9.7375

>NTDB_id=58458 I872_RS06135 WP_015605271.1 1227858..1229354(-) (amiC) [Streptococcus cristatus AS 1.3089]
MKKYIFMRILRSLVSIFLVTTLTYTIIYTMVPRRLIFKQDPNYNKVATTEDKKTNYENTVYERMGYVDYYDTKELQEKAK
KENKSVTTEPTEENKKIYEAYIEKLGKGWKLYQFKESKEFYAVREVPVYERVIEFYTNLIQIDHPNVIQDEENPNLERYI
RIENDPAIGWSVVGSGTRHKYLLYFNGQFPFVHQNFVSLNLGNSYPTYANTPVLQVISQGQGQTKSSEVQFPTGKKTSSV
NIYSRTYKTPSKADSQDIAKYGKGDAYTATKNNYQNPSMIASSAIIGLIGVALSYLIAVPLGSYMARLKNTWFDSISTAA
LTFMMSLPTIALVYIVRLAGSTLGLPDSFPILGASDWRSYVLPSLILGLLSAPWTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPASIVGVIAGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLIGD
VLMTMLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=58458 I872_RS06135 WP_015605271.1 1227858..1229354(-) (amiC) [Streptococcus cristatus AS 1.3089]
ATGAAAAAATACATTTTTATGCGTATTTTACGCTCACTTGTGTCGATTTTCTTGGTAACGACCTTGACCTATACCATTAT
TTATACAATGGTTCCGAGAAGATTGATTTTCAAACAAGACCCGAACTATAATAAGGTAGCCACAACCGAAGATAAAAAGA
CAAACTATGAAAATACAGTCTATGAGCGGATGGGCTATGTTGACTACTATGATACAAAAGAGTTGCAGGAAAAAGCAAAG
AAAGAAAATAAATCTGTAACGACTGAACCGACTGAAGAGAACAAGAAGATCTATGAAGCCTATATTGAGAAACTTGGCAA
AGGTTGGAAATTGTATCAATTCAAAGAAAGCAAGGAATTCTATGCTGTTCGTGAAGTTCCAGTTTACGAGCGTGTAATTG
AGTTTTACACAAATCTGATTCAGATTGACCATCCAAATGTGATTCAAGATGAGGAAAATCCAAATCTTGAGCGCTATATC
CGAATCGAAAATGACCCTGCTATTGGTTGGTCTGTCGTCGGATCTGGTACTCGTCATAAATACCTTCTATATTTCAATGG
TCAGTTCCCATTTGTTCACCAAAACTTTGTTAGCTTGAACCTAGGAAATTCTTACCCTACTTATGCTAATACACCTGTAC
TTCAGGTTATTTCGCAAGGGCAAGGTCAGACTAAATCATCAGAAGTTCAATTCCCAACTGGTAAGAAAACTTCTTCTGTC
AATATTTACTCTCGGACTTACAAGACACCAAGTAAAGCAGACTCTCAGGATATTGCCAAGTATGGTAAGGGAGATGCCTA
TACTGCAACTAAGAACAACTATCAAAATCCATCAATGATCGCCAGTTCAGCTATTATTGGTCTGATTGGTGTAGCTCTTT
CTTATTTGATTGCGGTCCCACTTGGATCATATATGGCTCGTTTGAAAAATACATGGTTTGATAGTATTTCAACAGCTGCC
TTGACCTTTATGATGTCCCTGCCAACGATTGCCCTTGTCTACATCGTTCGTCTGGCTGGTTCTACTCTAGGTCTTCCGGA
TTCCTTCCCAATTTTGGGAGCAAGTGATTGGCGTTCTTATGTTCTGCCATCTCTTATCCTCGGTCTTTTAAGCGCGCCGT
GGACAGCTGTCTGGATCCGTCGTTATATGATCGACTTGCAATCTCAAGACTTTGTCCGTTTTGCCCGTGCTAAAGGTCTT
TCTGAGAAAGAAATTTCTAACAAACATATTTTCAAAAATGCCATGGTACCATTGGTATCTAGTATTCCAGCCTCTATCGT
TGGTGTCATTGCCGGTGCGACTCTGACAGAAACAGTCTTTGCCTTCCCAGGGATGGGTAAAATGTTAATCGACTCTGTTA
AGGCGTCTAACAATTCAATGGTGGTTGGCCTTGTGTTTATTTTCACCTGTCTTTCAATCTTTGCCCTCTTAATTGGTGAT
GTGTTGATGACAATGCTTGACCCACGTATTAAATTAACATCTAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A512AC55

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.707

100

0.767
  amiC Streptococcus thermophilus LMD-9

76.305

100

0.763
  amiC Streptococcus thermophilus LMG 18311

76.305

100

0.763

Multiple sequence alignment