Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   I6L25_RS14815 Genome accession   NZ_CP077398
Coordinates   3165882..3167012 (+) Length   376 a.a.
NCBI ID   WP_031944817.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain FDAARGOS 1395     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3160882..3172012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L25_RS14790 (I6L25_14790) - 3161153..3161359 (-) 207 WP_004711026.1 DUF4199 domain-containing protein -
  I6L25_RS14795 (I6L25_14795) - 3161403..3163517 (-) 2115 WP_004711028.1 TonB-dependent copper receptor -
  I6L25_RS14800 (I6L25_14800) - 3163589..3164017 (-) 429 WP_002054220.1 DUF2946 family protein -
  I6L25_RS14805 (I6L25_14805) def 3164054..3164584 (-) 531 WP_002054252.1 peptide deformylase -
  I6L25_RS14810 (I6L25_14810) tsaP 3164707..3165861 (+) 1155 WP_004711032.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6L25_RS14815 (I6L25_14815) dprA 3165882..3167012 (+) 1131 WP_031944817.1 DNA-processing protein DprA Machinery gene
  I6L25_RS14820 (I6L25_14820) - 3167063..3167632 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  I6L25_RS14825 (I6L25_14825) - 3168025..3168945 (-) 921 WP_080631575.1 DMT family transporter -
  I6L25_RS14830 (I6L25_14830) - 3169051..3169704 (-) 654 WP_080631576.1 TetR/AcrR family transcriptional regulator -
  I6L25_RS14835 (I6L25_14835) - 3169839..3171053 (+) 1215 WP_004711040.1 MFS transporter -
  I6L25_RS14840 (I6L25_14840) - 3171075..3171839 (+) 765 WP_004711041.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41864.32 Da        Isoelectric Point: 6.4984

>NTDB_id=581188 I6L25_RS14815 WP_031944817.1 3165882..3167012(+) (dprA) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGTCEKATQPDGLAKWSSLGLHANHLKRVNEFQTAQGQAQFEQLIQQV
QQHTDFILTLDDSGYPTQLLPYTDHPPVIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQSQNEETNTYTSEIP
EHLIDLYQSLDWVGQNIDQLVIHHNVSVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=581188 I6L25_RS14815 WP_031944817.1 3165882..3167012(+) (dprA) [Acinetobacter nosocomialis strain FDAARGOS 1395]
ATGCTCACCCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAGCACTCATTAGTTAGTTTTAA
AAAAATTATCGATTATTTTGGAACTTGTGAAAAAGCAACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTTTGGGGTTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACAGCACAAGGCCAAGCTCAGTTCGAACAGCTTATACAACAAGTT
CAGCAGCATACTGATTTTATTTTGACGTTAGATGACTCTGGCTACCCTACTCAATTACTCCCTTATACAGATCATCCACC
TGTTATTTTTGGAAAAGGTCAGGCACAGGCATTATTGCAACCGCAAATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGTCAGGTGGCTTATGATTTCGCCTACTATTTAAGTGAAAAGGGCTTTTTTATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCAGCTCATCAAGGTGCATCCGCTCATCAACGTACAATTGCAGTCACTGGTACGGGCCTAGACACTACCTA
TCCAGCTCAAAATAAAAAACTGGCAGAACATATTTTGGCTCAGAACGGCGCCATTATTACTGAGTTTTTACCTGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTTAGTGGTTTGAGTTTAGGTGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCGCTCATCACGGCCAATAAAGCTGCTGAACAAGGCAAAACCGTATTCGCCATTCCGGGCCATATTTA
TAGTGAGTTCCATCAAGGATGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTTGATCATCCCGAACAAATTATTGAAG
ACCTCGCCTTACCAACTCAATGGCAAAGCCAGCAACAAAGTCAAAATGAAGAAACTAATACGTATACTTCAGAAATTCCT
GAGCATTTGATTGATCTTTATCAGTCTTTAGACTGGGTAGGACAAAATATTGACCAGCTTGTAATTCATCATAATGTTTC
GGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

95.479

100

0.955

  dprA Acinetobacter baumannii D1279779

95.479

100

0.955

  dprA Acinetobacter baylyi ADP1

70.866

100

0.718

  dprA Vibrio cholerae strain A1552

43.202

88.032

0.38