Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   I6L25_RS14810 Genome accession   NZ_CP077398
Coordinates   3164707..3165861 (+) Length   384 a.a.
NCBI ID   WP_004711032.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain FDAARGOS 1395     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3159707..3170861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L25_RS14785 (I6L25_14785) - 3159870..3161084 (+) 1215 WP_004711024.1 oxygenase MpaB family protein -
  I6L25_RS14790 (I6L25_14790) - 3161153..3161359 (-) 207 WP_004711026.1 DUF4199 domain-containing protein -
  I6L25_RS14795 (I6L25_14795) - 3161403..3163517 (-) 2115 WP_004711028.1 TonB-dependent copper receptor -
  I6L25_RS14800 (I6L25_14800) - 3163589..3164017 (-) 429 WP_002054220.1 DUF2946 family protein -
  I6L25_RS14805 (I6L25_14805) def 3164054..3164584 (-) 531 WP_002054252.1 peptide deformylase -
  I6L25_RS14810 (I6L25_14810) tsaP 3164707..3165861 (+) 1155 WP_004711032.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6L25_RS14815 (I6L25_14815) dprA 3165882..3167012 (+) 1131 WP_031944817.1 DNA-processing protein DprA Machinery gene
  I6L25_RS14820 (I6L25_14820) - 3167063..3167632 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  I6L25_RS14825 (I6L25_14825) - 3168025..3168945 (-) 921 WP_080631575.1 DMT family transporter -
  I6L25_RS14830 (I6L25_14830) - 3169051..3169704 (-) 654 WP_080631576.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42276.20 Da        Isoelectric Point: 8.5822

>NTDB_id=581187 I6L25_RS14810 WP_004711032.1 3164707..3165861(+) (tsaP) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MKKVFNGMAEFHALGIKKHLLALALCTTVALGTVAEVHAASPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYVVGTADQRVLAGKGQTIYARGKGLVDGQRYAVYREGEPYYFTDSKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKHSVVTLDRGTAQGVQVGQ
VFDITQQGETIRDPKTKEAIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPRFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=581187 I6L25_RS14810 WP_004711032.1 3164707..3165861(+) (tsaP) [Acinetobacter nosocomialis strain FDAARGOS 1395]
ATGAAAAAGGTTTTTAACGGCATGGCTGAATTTCATGCTTTGGGGATAAAGAAGCATTTACTTGCTTTAGCACTCTGTAC
AACTGTCGCACTAGGTACGGTAGCAGAGGTTCATGCTGCCAGTCCAAATCATAATCCACCTTCTCTTAAAAGCAATGCAC
CGAATGTGTATGTTGTAAAACGTGGGGATACCCTATGGGATATTTCCGGCCATTTTCTCAATAAGCCATGGCGTTGGCCT
GAAATTTGGGCAAGTAATCAACATGTTAAAAACCCTCACTGGATTTATCCGGGCGATCGGTTACTGTTATGTAGCTTAGA
TGGACGTCCACTTGTGGGCAAAGATGAAGGGGATGGCTGTGTAGGCATTATTCGTCGTTACACAGGCCAAACCACAAACT
TACAACCACAAGTTCGCGTAGAAGCATTAAATAATAGTGTGCCAGTTATTCCACTTGAACATATTAAACAGTGGCTAGAG
AACAGCACTATTTTACCAGCCGATTCAATTACCAACACACCTTACGTTGTTGGTACAGCCGACCAACGTGTACTTGCAGG
AAAAGGTCAAACTATTTATGCAAGAGGAAAAGGTCTAGTTGATGGTCAGCGTTATGCAGTCTATCGAGAAGGTGAACCTT
ACTATTTCACAGATAGTAAAGGTAAAAAGCATAGCCTTGGTATTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGACATTACTACATTAGAGCTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACCTTATTTTACCCAGTAGATGCCAAACAAGTGACTGATGGGGGCAAAATTATTCGTGTCA
TGGGTTCAATCGGTAGAGCTGCAAAACATAGTGTAGTGACTTTGGACCGCGGTACAGCACAAGGTGTTCAGGTAGGTCAA
GTTTTTGATATTACACAACAAGGCGAGACAATTCGCGATCCTAAAACTAAAGAAGCGATTCAACTTCCTGGTCAACAAAT
TGGGAGTCTGATGGTTTTTAGAACTTTTGATCAGCTGAGTTATGCCTATGTTCTAGAAAGCGATTTGCCTATTAAAGTCG
GCTCAAGCATTCAGCCACCTCGCTTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

95.052

100

0.951