Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6L85_RS00045 Genome accession   NZ_CP077248
Coordinates   9930..10694 (-) Length   254 a.a.
NCBI ID   WP_111724269.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS 1455     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4930..15694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L85_RS00025 (I6L85_00025) - 6343..6861 (+) 519 WP_111723073.1 DUF1307 domain-containing protein -
  I6L85_RS00030 (I6L85_00030) - 6880..7083 (-) 204 WP_008808039.1 DUF951 domain-containing protein -
  I6L85_RS00035 (I6L85_00035) dnaN 7083..8219 (-) 1137 WP_111723072.1 DNA polymerase III subunit beta -
  I6L85_RS00040 (I6L85_00040) dnaA 8375..9727 (-) 1353 WP_111723071.1 chromosomal replication initiator protein DnaA -
  I6L85_RS00045 (I6L85_00045) spo0J 9930..10694 (-) 765 WP_111724269.1 ParB/RepB/Spo0J family partition protein Regulator
  I6L85_RS00050 (I6L85_00050) htrA 10760..11953 (-) 1194 WP_111724268.1 S1C family serine protease Regulator
  I6L85_RS00055 (I6L85_00055) rlmH 12147..12626 (+) 480 WP_008808034.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6L85_RS00065 (I6L85_00065) comC/comC1 12912..13076 (+) 165 WP_080998577.1 bacteriocin Regulator
  I6L85_RS00070 (I6L85_00070) comD/comD1 13089..14450 (+) 1362 WP_269459934.1 competence system sensor histidine kinase ComD Regulator
  I6L85_RS00075 (I6L85_00075) comE/comE2 14447..15214 (+) 768 WP_008808031.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 29307.00 Da        Isoelectric Point: 9.3146

>NTDB_id=580226 I6L85_RS00045 WP_111724269.1 9930..10694(-) (spo0J) [Streptococcus gordonii strain FDAARGOS 1455]
MENYQYILIKDIHTNPYQPRKDFSIEKLNELANSIKENGLIQPIIVRKSSIIGYELLAGERRFRAAKIAGLTEIPALVKS
LSDDEMMKQAIIENLQREDLNPIEEAESYQNLIYKGLTHDEIAQIMGKSRPYITNLVRLLQLPDFVLKAVKEGHISQAHA
RLLIKLKEKDQRKWLENIISSDISVRKLEKLLQTSPIKPKSENVQKIFIEEEEENLKKLLGVDVKISLSKKQTGKISISF
SNQEEYERIINSLK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=580226 I6L85_RS00045 WP_111724269.1 9930..10694(-) (spo0J) [Streptococcus gordonii strain FDAARGOS 1455]
ATGGAAAATTATCAATATATTTTAATTAAAGATATTCACACCAATCCCTATCAACCAAGAAAAGATTTTTCAATAGAGAA
ATTAAACGAGTTAGCAAATTCTATTAAAGAAAACGGATTAATTCAGCCTATTATTGTTAGGAAATCATCTATCATTGGAT
ACGAACTTTTAGCTGGGGAAAGACGATTTAGGGCAGCTAAAATAGCAGGTTTAACTGAAATTCCTGCCTTAGTAAAATCA
CTAAGCGATGATGAAATGATGAAGCAGGCTATTATTGAAAATCTTCAAAGAGAGGATCTCAATCCAATAGAAGAAGCTGA
ATCTTATCAGAATCTTATTTACAAGGGATTAACGCATGATGAAATCGCTCAAATTATGGGGAAATCGAGACCTTATATTA
CTAATCTTGTTCGCTTGCTACAGCTACCTGATTTTGTATTAAAAGCGGTAAAAGAGGGGCATATTTCTCAAGCTCATGCT
CGGTTACTAATAAAGCTTAAGGAAAAAGACCAGAGAAAATGGCTTGAAAATATTATTTCTTCAGATATTTCTGTTAGAAA
ATTAGAAAAATTATTACAGACTTCTCCTATTAAGCCCAAATCTGAAAATGTCCAAAAAATTTTTATAGAGGAAGAAGAAG
AAAATCTAAAGAAATTATTGGGAGTTGATGTAAAGATTAGTCTCTCTAAGAAACAAACTGGCAAAATCTCAATTTCTTTT
TCTAATCAGGAAGAATACGAAAGAATTATTAACAGTCTTAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.937

100

0.539