Detailed information NTG0577829

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KQY33_RS14560
• Genome accession: NZ_CP076733
• Coordinates: 3164760..3166292 (-)
• Length: 510 a.a.
• NCBI ID: WP_106142304.1
• Uniprot ID: -
• Organism: Photobacterium damselae strain Pdd2008
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3159760..3171292

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQY33_RS14530 (KQY33_14485)	-	3159766..3160440 (-)	675	WP_065171008.1	FadR/GntR family transcriptional regulator	-
KQY33_RS14535 (KQY33_14490)	-	3160821..3160994 (+)	174	WP_005302173.1	hypothetical protein	-
KQY33_RS14540 (KQY33_14495)	-	3161170..3161436 (+)	267	WP_005302176.1	YihD family protein	-
KQY33_RS14545 (KQY33_14500)	ccoG	3161625..3162962 (+)	1338	WP_284633857.1	cytochrome c oxidase accessory protein CcoG	-
KQY33_RS14550 (KQY33_14505)	-	3163005..3163994 (+)	990	WP_284633858.1	serine/threonine protein kinase	-
KQY33_RS14555 (KQY33_14510)	-	3164081..3164683 (+)	603	WP_005302184.1	thiol:disulfide interchange protein DsbA/DsbL	-
KQY33_RS14560 (KQY33_14515)	comM	3164760..3166292 (-)	1533	WP_106142304.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KQY33_RS14565 (KQY33_14520)	ilvG	3166832..3168478 (+)	1647	WP_176285901.1	acetolactate synthase 2 catalytic subunit	-
KQY33_RS14570 (KQY33_14525)	ilvM	3168481..3168738 (+)	258	WP_036764608.1	acetolactate synthase 2 small subunit	-
KQY33_RS14575 (KQY33_14530)	-	3168778..3169707 (+)	930	WP_284633859.1	branched-chain amino acid transaminase	-

Sequence

Protein

• Length: 510 a.a.
• Molecular weight: 55151.42 Da
• Isoelectric Point: 8.2787

>NTDB_id=577829 KQY33_RS14560 WP_106142304.1 3164760..3166292(-) (comM) [Photobacterium damselae strain Pdd2008]
MSLAIVHSRACVGVQAPAVTVEVHLSNGMPSFTLVGLPETTVKEAKDRVRSAIFNANFEFPSRRITVNLAPADLPKEGGR
FDLPIALGILAASGQIPAESLHKYEFLGELALSGQLRPVKGALPAALAALKAKRCLIVPDRNGDQVALVGEKQHKSAPDL
IQVCAHLLGQQSLSLRFQTKPDDDSLDLTQGRDMQDIIGQQQGKRALEIAAAGGHNLLFLGPPGTGKTMLASRLCDLLPP
MSHDEALETAAVASLTQQSIHQGNWLQRPLRAPHHSSSMAALVGGGSIPRPGEISLAHNGILFLDEMPEFERKVLDSLRE
PLESGEIVISRATSKATFPANFQLIGALNPSPTGFYEGAQTRTNPQVILRYLSKLSGPLLDRFDMSIEIPALPKGTLAQG
GERGESTPVIKTRVNQARTLMDQRAGKVNARLSTRELDKHCALAREDAEFLENALHQLGLSIRAYHRIIKVARTIADLSN
CEQIERAHLAEALGYRAMDRLLKQLTAQAI

Nucleotide

• Length: 1533 bp

>NTDB_id=577829 KQY33_RS14560 WP_106142304.1 3164760..3166292(-) (comM) [Photobacterium damselae strain Pdd2008]
ATGTCATTGGCCATTGTGCATAGCCGGGCTTGCGTTGGGGTACAAGCTCCAGCAGTAACTGTTGAAGTTCATTTAAGTAA
TGGAATGCCCAGTTTTACTCTGGTGGGTTTACCTGAGACAACGGTAAAAGAGGCCAAAGATCGGGTTCGAAGTGCCATTT
TTAATGCCAATTTTGAGTTTCCCTCTCGGCGAATTACCGTCAATTTAGCGCCCGCTGATTTGCCTAAAGAAGGGGGCCGA
TTTGACCTACCCATCGCGCTTGGAATTTTAGCTGCTTCAGGACAAATACCCGCAGAATCACTGCATAAATACGAATTTTT
AGGGGAGTTGGCCTTATCGGGGCAATTGCGTCCGGTAAAGGGGGCGCTGCCTGCTGCTCTTGCTGCATTAAAGGCGAAAA
GGTGCTTGATTGTTCCTGATCGTAATGGCGATCAAGTGGCATTAGTAGGCGAAAAACAACATAAGTCAGCGCCTGATTTG
ATCCAAGTTTGCGCTCACCTATTAGGACAGCAAAGTTTATCTTTACGCTTTCAAACAAAACCCGATGATGATTCGTTAGA
TCTGACTCAGGGGCGAGATATGCAAGATATTATTGGTCAGCAGCAAGGTAAGCGGGCATTGGAAATTGCAGCTGCCGGTG
GCCATAACCTTCTGTTTCTTGGCCCTCCTGGAACGGGAAAAACCATGTTAGCCTCTCGGTTATGTGATTTATTACCCCCT
ATGAGCCATGATGAGGCGTTAGAAACTGCAGCTGTTGCCTCGCTGACTCAGCAGAGCATTCATCAAGGCAATTGGTTACA
ACGACCGCTACGAGCACCTCATCATTCAAGTTCTATGGCTGCCTTAGTTGGAGGTGGTTCAATTCCAAGGCCGGGCGAGA
TCTCTTTGGCGCATAACGGCATTCTTTTTTTAGATGAAATGCCCGAATTTGAGCGTAAGGTTTTGGACTCATTACGTGAA
CCTTTAGAGTCGGGAGAGATTGTGATTTCTCGGGCAACCAGTAAAGCAACCTTTCCAGCAAATTTTCAATTGATTGGAGC
GCTAAACCCAAGTCCAACAGGTTTTTATGAAGGCGCACAAACTCGAACTAATCCTCAAGTTATTTTGCGCTATCTCAGTA
AGCTCTCCGGCCCGCTGCTTGATAGGTTTGATATGTCGATTGAGATCCCAGCTCTACCGAAAGGTACTTTAGCTCAAGGT
GGTGAGCGCGGTGAGAGTACTCCTGTGATTAAAACGCGAGTTAATCAGGCGCGAACCTTAATGGATCAGCGAGCAGGAAA
AGTGAATGCTCGACTTTCGACTCGGGAGTTAGATAAACATTGCGCTCTGGCTCGAGAAGATGCGGAGTTTCTTGAAAATG
CACTGCATCAGTTGGGGCTATCGATTCGTGCGTACCACCGTATTATTAAGGTGGCACGAACCATTGCCGATTTAAGTAAT
TGTGAGCAGATAGAGCGAGCGCATTTAGCTGAAGCATTAGGATATCGAGCAATGGATCGGTTATTGAAGCAGTTAACGGC
TCAAGCGATATGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (193-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	76.863	100	0.769
comM	Vibrio cholerae strain A1552	76.471	100	0.765
comM	Glaesserella parasuis strain SC1401	63.333	100	0.633
comM	Haemophilus influenzae Rd KW20	62.722	99.412	0.624
comM	Legionella pneumophila str. Paris	49.699	97.843	0.486
comM	Legionella pneumophila strain ERS1305867	49.699	97.843	0.486
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.083	99.216	0.427