Detailed information NTG0577262

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KQ248_RS01420
• Genome accession: NZ_CP076683
• Coordinates: 290346..291410 (-)
• Length: 354 a.a.
• NCBI ID: WP_045430802.1
• Uniprot ID: A0A365PW20
• Organism: Stutzerimonas zhaodongensis strain A252
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 285346..296410

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ248_RS01395 (KQ248_01395)	aroK	285916..286461 (-)	546	WP_128120283.1	shikimate kinase AroK	-
KQ248_RS01400 (KQ248_01400)	pilQ	286467..288578 (-)	2112	WP_128120282.1	type IV pilus secretin PilQ	Machinery gene
KQ248_RS01405 (KQ248_01405)	pilP	288630..289157 (-)	528	WP_128120281.1	type 4a pilus biogenesis lipoprotein PilP	-
KQ248_RS01410 (KQ248_01410)	pilO	289154..289777 (-)	624	WP_046162909.1	type 4a pilus biogenesis protein PilO	-
KQ248_RS01415 (KQ248_01415)	pilN	289774..290346 (-)	573	WP_128120280.1	type 4a pilus biogenesis protein PilN	-
KQ248_RS01420 (KQ248_01420)	comM	290346..291410 (-)	1065	WP_045430802.1	pilus assembly protein PilM	Machinery gene
KQ248_RS01425 (KQ248_01425)	-	291595..294048 (+)	2454	WP_128120279.1	penicillin-binding protein 1A	-
KQ248_RS01430 (KQ248_01430)	-	294179..295447 (-)	1269	WP_128120278.1	malic enzyme-like NAD(P)-binding protein	-
KQ248_RS01435 (KQ248_01435)	-	295574..296368 (-)	795	WP_128120277.1	thermonuclease family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37807.24 Da
• Isoelectric Point: 4.6397

>NTDB_id=577262 KQ248_RS01420 WP_045430802.1 290346..291410(-) (comM) [Stutzerimonas zhaodongensis strain A252]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGSRYRVESYAVEPLPPNAVVEKNIAELEGVGQALSRLLGKAKTGVKSAAV
AVSGSAVITKSIEMEAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRSPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLAPQLGAGHDELTVALVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSM
EEAGLAKKQGGLPDDFDSEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDYILLAGGTASIPGLDRLIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPSLMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=577262 KQ248_RS01420 WP_045430802.1 290346..291410(-) (comM) [Stutzerimonas zhaodongensis strain A252]
GTGCTAGGGCTATTCACTAAGAAAGCGAACACGCTGCTTGGGATCGACATCAGTTCGACGTCCGTCAAGCTACTGGAATT
AAGCCGCTCAGGTTCCCGGTATCGGGTTGAGTCCTATGCGGTTGAGCCACTCCCGCCAAATGCTGTGGTTGAAAAAAACA
TCGCTGAGCTGGAGGGCGTGGGGCAGGCGCTTTCCCGACTGTTAGGCAAGGCAAAAACTGGAGTCAAGTCGGCTGCTGTA
GCGGTATCTGGTTCGGCGGTCATCACTAAAAGCATCGAGATGGAAGCCGGGCTCAGCGACGAAGAGCTGGAAAACCAGTT
GAAGATCGAAGCTGACCAGTACATTCCCTACCCTCTCGAAGAGGTCGCCATCGACTTCGAGGTGCAGGGTCCTGCCCCTC
GTTCGCCTGGTCGGGTTGAAGTGTTACTGGCAGCGTGCCGCAAGGAAAACGTGGAAATACGTGAAGCGGCGCTCGCCTTG
GCGGGGCTGACGGCAAAGGTCGTTGATGTCGAAGCCTATGCGTTGGAGCGCTCCTATGGCTTGCTGGCGCCCCAGTTGGG
TGCTGGACATGACGAGCTGACCGTCGCGCTCGTCGACATCGGCGCGACCATGACCACACTTAGCGTATTGCACAACGGCC
GTACTATTTATACGCGAGAACAACTGTTCGGTGGTCGTCAGCTCACCGAGGAAATACAGCGGCGTTATGGGTTGTCAATG
GAAGAGGCGGGCCTGGCCAAGAAACAGGGAGGCCTCCCAGACGACTTCGACAGCGAAGTGTTGCAGCCGTTCAAGGAGGC
GGTCGTTCAACAGGTTTCGCGCTCTCTGCAGTTCTTCTTCGCGGCCGGGCAGTTCCACGATGTGGATTACATTCTCCTGG
CAGGCGGCACGGCATCGATCCCAGGGTTGGATCGGCTGATTCAGCAGAAAATCGGAACCCAGACTTTAGTCGCCAACCCG
TTCGCCGATATGGCATTGAGCAGCAAGGTCAACGCTGGCGCTCTCGCCAGTGATGCGCCGTCCCTGATGATCGCTTGTGG
GTTGGCCTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A365PW20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	56.497	100	0.565
pilM	Acinetobacter baumannii D1279779	56.497	100	0.565
comM	Acinetobacter baylyi ADP1	54.52	100	0.545
pilM	Legionella pneumophila strain ERS1305867	47.175	100	0.472