Detailed information NTG0574679

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KNN15_RS05345
• Genome accession: NZ_CP076325
• Coordinates: 951666..953150 (-)
• Length: 494 a.a.
• NCBI ID: WP_028494729.1
• Uniprot ID: -
• Organism: MAG: Thermus antranikianii isolate RBS10-92
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 946666..958150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KNN15_RS05320 (KNN15_05250)	-	947710..949245 (+)	1536	WP_273107136.1	carboxypeptidase M32	-
KNN15_RS05325 (KNN15_05255)	-	949233..950309 (-)	1077	WP_273107139.1	YbfB/YjiJ family MFS transporter	-
KNN15_RS05330 (KNN15_05260)	-	950299..950940 (-)	642	WP_273107141.1	ABC transporter permease	-
KNN15_RS05335 (KNN15_05265)	-	950942..951268 (-)	327	WP_028494731.1	nucleotide pyrophosphohydrolase	-
KNN15_RS05340 (KNN15_05270)	mgsA	951292..951669 (+)	378	WP_028494730.1	methylglyoxal synthase	-
KNN15_RS05345 (KNN15_05275)	comM	951666..953150 (-)	1485	WP_028494729.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KNN15_RS05350 (KNN15_05280)	-	953422..954567 (-)	1146	WP_028494728.1	MFS transporter	-
KNN15_RS05355 (KNN15_05285)	-	954569..955381 (-)	813	WP_028494727.1	EamA family transporter	-
KNN15_RS05360 (KNN15_05290)	-	955378..956265 (-)	888	WP_028494726.1	DMT family transporter	-
KNN15_RS05365 (KNN15_05295)	-	956372..957499 (+)	1128	WP_273107144.1	NAD(P) transhydrogenase subunit alpha	-
KNN15_RS05370 (KNN15_05300)	-	957499..957801 (+)	303	WP_028494724.1	proton-translocating transhydrogenase family protein	-

Sequence

Protein

• Length: 494 a.a.
• Molecular weight: 52862.05 Da
• Isoelectric Point: 7.8126

>NTDB_id=574679 KNN15_RS05345 WP_028494729.1 951666..953150(-) (comM) [MAG: Thermus antranikianii isolate RBS10-92]
MLAQVRSYTLFGLDAVPVTVEVDVSPGLPSYALVGLPDKAVEESRERVRAALKNSGFPYPQARVVVNLAPAELRKEGSHF
DLPIALGLLAAQGVVPLEGLAGLAVAGELGLDGTLRPVPGAVNLALGALGEGKKLLLPLESAKEAALVEGVEVYGVENLL
QAVAYLRGEEEPRRVEPDDPVAALEALDLRDVKGQAKAKRALEIAAAGYHHLLMVGSPGSGKTMLARRLPFLLPPLSQEA
ALEVSRIHSAAGQILKGLVRTPPFRAPHHTVSYAGLIGGGAIPKPGEVSLAHRGVLFLDEFPEFSRDALEALRQPLEDGV
VTVSRARASLTFPARFLLVAAMNPCPCGWYGDPERACTCTPASRQRYVGKISGPLLDRFDLVVEVPRLTPAELARAPEGE
GTEAVRERVLRARERMLARQGRPNGELAGKALREHVRLTSGAENLLQAAAKRMLLSARSYDRLLRVARTIADLQGAESVE
ENHVAEALAYRKTL

Nucleotide

• Length: 1485 bp

>NTDB_id=574679 KNN15_RS05345 WP_028494729.1 951666..953150(-) (comM) [MAG: Thermus antranikianii isolate RBS10-92]
ATGCTAGCCCAGGTGCGAAGCTATACCCTCTTCGGCCTGGACGCGGTTCCCGTCACCGTGGAGGTGGATGTTAGCCCCGG
GCTTCCCAGCTACGCCCTGGTGGGGTTGCCGGACAAGGCGGTGGAGGAAAGCCGGGAGCGGGTCAGGGCCGCCCTAAAGA
ACTCGGGCTTCCCCTACCCCCAGGCCCGGGTGGTGGTGAACCTGGCCCCGGCGGAACTCCGTAAGGAAGGAAGCCACTTT
GACCTGCCCATCGCCTTGGGGCTTCTGGCCGCCCAAGGGGTGGTGCCCCTGGAGGGCCTGGCGGGCCTGGCGGTGGCCGG
GGAGCTGGGCCTGGATGGAACCCTGCGCCCGGTGCCCGGGGCGGTGAACCTGGCTTTGGGGGCCTTGGGCGAAGGGAAAA
AGCTCCTCCTGCCCCTGGAAAGCGCCAAGGAGGCCGCCTTGGTGGAGGGGGTGGAGGTCTACGGGGTGGAAAACCTCCTT
CAGGCGGTGGCCTACCTGAGGGGAGAAGAGGAGCCCAGGAGGGTGGAGCCCGACGATCCCGTGGCCGCCCTGGAGGCTTT
GGACCTCCGGGACGTGAAGGGCCAGGCCAAGGCCAAAAGGGCCCTGGAGATCGCCGCCGCCGGTTACCACCACCTCCTTA
TGGTGGGAAGCCCGGGCTCGGGAAAAACTATGCTGGCTAGGCGCCTTCCCTTTCTGCTTCCCCCTTTGAGCCAGGAGGCC
GCCCTCGAGGTAAGCCGCATCCACTCCGCCGCCGGGCAGATCCTTAAGGGCCTGGTGCGCACGCCCCCCTTCCGCGCCCC
CCACCACACGGTGAGCTACGCGGGCCTCATCGGGGGCGGGGCCATCCCCAAGCCGGGGGAGGTTTCCCTGGCCCACCGGG
GGGTGCTTTTCCTGGACGAGTTCCCCGAGTTTTCCCGGGATGCCCTGGAAGCCCTCCGCCAGCCCCTCGAGGACGGGGTG
GTGACCGTCTCCCGGGCCAGGGCCAGCCTCACCTTCCCCGCCCGCTTCCTCCTGGTGGCGGCCATGAACCCCTGCCCCTG
CGGCTGGTACGGGGACCCGGAGCGGGCCTGCACCTGCACCCCGGCAAGCCGCCAGCGCTACGTGGGGAAGATCTCCGGAC
CTCTCCTGGACCGGTTTGACCTGGTGGTGGAGGTGCCCCGCTTAACCCCAGCTGAGCTCGCCCGCGCCCCCGAAGGGGAA
GGCACCGAGGCCGTGCGGGAAAGGGTCCTAAGGGCCCGGGAGAGGATGCTCGCCCGGCAGGGCAGGCCCAACGGGGAGCT
TGCGGGAAAGGCCCTGAGGGAGCACGTACGCTTAACCTCGGGGGCGGAAAACCTCCTCCAGGCAGCGGCCAAGCGGATGC
TCCTTTCCGCCAGGAGCTACGACCGCCTCCTCCGGGTAGCCCGCACCATCGCCGACCTGCAGGGAGCGGAGAGCGTGGAG
GAAAACCACGTGGCCGAGGCCTTGGCCTACCGCAAGACCCTCTAG

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (20-139)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-491)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (188-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	48.687	100	0.488
comM	Haemophilus influenzae Rd KW20	46.386	100	0.468
comM	Glaesserella parasuis strain SC1401	45.984	100	0.464
comM	Vibrio campbellii strain DS40M4	46.154	100	0.462
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.328	100	0.462
comM	Legionella pneumophila str. Paris	45.473	100	0.457
comM	Legionella pneumophila strain ERS1305867	45.473	100	0.457