Detailed information NTG0571986

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: D16iCDA_RS13345
• Genome accession: NZ_CP076114
• Coordinates: 2900548..2901612 (+)
• Length: 354 a.a.
• NCBI ID: WP_070880250.1
• Uniprot ID: A0A1G7LUY8
• Organism: Phytopseudomonas seleniipraecipitans strain D1-6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2895548..2906612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D16iCDA_RS13335 (D16iCDA_13340)	-	2896442..2897710 (+)	1269	WP_070880252.1	malic enzyme-like NAD(P)-binding protein	-
D16iCDA_RS13340 (D16iCDA_13345)	-	2897928..2900366 (-)	2439	WP_070880251.1	penicillin-binding protein 1A	-
D16iCDA_RS13345 (D16iCDA_13350)	pilM	2900548..2901612 (+)	1065	WP_070880250.1	pilus assembly protein PilM	Machinery gene
D16iCDA_RS13350 (D16iCDA_13355)	-	2901612..2902184 (+)	573	WP_070880249.1	PilN domain-containing protein	-
D16iCDA_RS13355 (D16iCDA_13360)	pilO	2902181..2902804 (+)	624	WP_070880248.1	type 4a pilus biogenesis protein PilO	-
D16iCDA_RS13360 (D16iCDA_13365)	pilP	2902801..2903319 (+)	519	WP_070880247.1	type 4a pilus biogenesis lipoprotein PilP	-
D16iCDA_RS13365 (D16iCDA_13370)	pilQ	2903374..2905518 (+)	2145	WP_070880246.1	type IV pilus secretin PilQ	Machinery gene
D16iCDA_RS13370 (D16iCDA_13375)	aroK	2905522..2906040 (+)	519	WP_070880245.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38022.31 Da
• Isoelectric Point: 4.4221

>NTDB_id=571986 D16iCDA_RS13345 WP_070880250.1 2900548..2901612(+) (pilM) [Phytopseudomonas seleniipraecipitans strain D1-6]
MLGLFSKKANTLLGIDISSTSVKLLELSRSGSRYKVEAYAVEPLPANAIVEKNIAELEGVGQALSRVLAKAKTNVRSVSV
AVAGSAVITKTVEMEAGLSDDELENQLKLEADQYIPYPLEEVAIDFEVQGISPRNPERVEVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERAYGLLAEQLGDSHDDLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
DEAGLAKKQGGLPDDYESEVLQPFKDALVQQVSRSLQFFFAAGQYNDVDYILLAGGTASIPDLDRLIQQKIGTQTLVANP
FADMALSGKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=571986 D16iCDA_RS13345 WP_070880250.1 2900548..2901612(+) (pilM) [Phytopseudomonas seleniipraecipitans strain D1-6]
GTGCTAGGGCTCTTCAGTAAGAAAGCGAATACGCTTTTGGGGATCGATATAAGTTCGACCTCGGTCAAGCTCCTTGAATT
GAGTCGCTCGGGAAGCCGCTACAAAGTAGAGGCCTACGCTGTCGAGCCGCTCCCAGCCAACGCAATCGTCGAAAAGAACA
TCGCCGAATTAGAGGGTGTCGGTCAGGCGCTGTCGCGCGTGTTGGCGAAAGCCAAGACCAATGTGCGCTCGGTGTCAGTC
GCCGTCGCCGGGTCTGCGGTCATCACCAAAACCGTGGAGATGGAAGCCGGTCTGTCTGACGACGAGTTGGAAAATCAGCT
GAAGCTGGAAGCTGATCAGTACATTCCTTATCCACTGGAAGAAGTGGCGATCGATTTCGAAGTCCAGGGCATTTCACCGC
GCAATCCCGAGCGGGTCGAAGTGCTGCTGGCTGCCTGCCGCAAAGAGAACGTCGAGGTTCGCGAGGCGGCTCTGGCGTTG
GCAGGCCTGACTGCCAAGGTGGTGGACGTCGAGGCCTACGCGCTGGAGCGCGCCTATGGCCTGCTGGCCGAACAGCTCGG
CGATAGCCATGATGACCTGACTGTTGCGGTCGTCGACATTGGGGCGACCATGACCACCCTGAGCGTGCTGCATAACGGGC
GCACCATTTACACCCGTGAGCAGCTGTTTGGTGGTCGCCAGCTGACCGAAGAAATTCAGCGTCGCTACGGCCTGTCCGTC
GATGAGGCCGGCCTCGCCAAAAAGCAGGGTGGGCTGCCGGACGATTATGAAAGCGAAGTGTTGCAACCGTTCAAGGATGC
CCTGGTGCAACAGGTGTCCCGTTCCCTGCAATTCTTCTTCGCTGCTGGCCAGTACAACGATGTCGATTACATCCTGCTGG
CTGGCGGCACTGCGTCGATCCCTGATCTTGACCGCCTCATTCAGCAGAAAATCGGCACCCAGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCCCTCAGCGGCAAGGTCAATGCGGGTGCGCTGGCCAGTGATGCGCCGGCGCTGATGATTGCCTGCGG
CCTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A1G7LUY8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.367	100	0.554
comM	Acinetobacter nosocomialis M2	55.367	100	0.554
comM	Acinetobacter baylyi ADP1	52.542	100	0.525
pilM	Legionella pneumophila strain ERS1305867	46.893	100	0.469