Detailed information NTG0569809

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KHO27_RS21630
• Genome accession: NZ_CP075595
• Coordinates: 4730048..4731535 (+)
• Length: 495 a.a.
• NCBI ID: WP_110697026.1
• Uniprot ID: -
• Organism: Pseudomonas sp. RC3H12
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 4725048..4736535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHO27_RS21610 (KHO27_21610)	-	4725298..4725657 (+)	360	WP_110697033.1	DUF2493 domain-containing protein	-
KHO27_RS21615 (KHO27_21615)	-	4725836..4726318 (+)	483	WP_110697031.1	sigma-70 family RNA polymerase sigma factor	-
KHO27_RS21620 (KHO27_21620)	-	4726315..4727256 (+)	942	WP_110697029.1	FecR domain-containing protein	-
KHO27_RS21625 (KHO27_21625)	-	4727338..4729851 (+)	2514	WP_214500742.1	TonB-dependent receptor	-
KHO27_RS21630 (KHO27_21630)	comM	4730048..4731535 (+)	1488	WP_110697026.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KHO27_RS21635 (KHO27_21635)	-	4731696..4731947 (+)	252	WP_110697025.1	DUF2790 domain-containing protein	-
KHO27_RS21640 (KHO27_21640)	-	4731979..4732995 (+)	1017	WP_110697024.1	alpha/beta hydrolase	-
KHO27_RS21645 (KHO27_21645)	-	4733242..4735029 (+)	1788	WP_214500743.1	monovalent cation:proton antiporter-2 (CPA2) family protein	-
KHO27_RS21650 (KHO27_21650)	-	4735033..4735317 (-)	285	WP_046853662.1	HigA family addiction module antitoxin	-
KHO27_RS21655 (KHO27_21655)	-	4735800..4736084 (+)	285	WP_102690648.1	DUF3077 domain-containing protein	-

Sequence

Protein

• Length: 495 a.a.
• Molecular weight: 52897.65 Da
• Isoelectric Point: 7.9062

>NTDB_id=569809 KHO27_RS21630 WP_110697026.1 4730048..4731535(+) (comM) [Pseudomonas sp. RC3H12]
MSLALVHSRAQVGVQAPAVSVETHLANGLPTLTLVGLPETTVKESKDRVRSAIVNSGLDYPARRITQSLAPADLPKDGGR
YDLAIALGILAANGQVPVAALDSIECLGELALSGTLRPVQGVLPAALAARDAGRALVVPKENAEEASLASGLVVYAVGHL
RELVAHLNAQPSLPPYAANGLLLEQRPYPDLSEVQGQIAAKRALLVAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLDE
REALEVAAIRSVSGHAPLDCWPQRPFRHPHHSASGPALVGGGSRPQPGEITLAHHGVLFLDELPEFERRVLEVLREPLES
GEIVVARAKDRVRFPARFQLVAAMNPCPCGYLGDPTGRCRCSSEQIQRYRNKLSGPLLDRIDLHLTVARESTVLTHQPSG
ETSASVGQQVAEARELQQRRQGCANAFLDLKGLRRHCPLEPVDQAWLEQACERLTLSLRAAHRLLKVARTLADLEGAQSI
ARSHLAEALQYRPSA

Nucleotide

• Length: 1488 bp

>NTDB_id=569809 KHO27_RS21630 WP_110697026.1 4730048..4731535(+) (comM) [Pseudomonas sp. RC3H12]
ATGTCCCTCGCCCTCGTCCACAGCCGCGCCCAGGTGGGGGTGCAAGCACCCGCCGTCAGTGTCGAAACCCACCTGGCCAA
CGGCCTGCCCACGCTCACCCTGGTTGGCCTGCCGGAAACCACGGTCAAGGAGAGCAAGGACCGGGTACGCAGCGCCATCG
TCAACTCCGGGCTGGACTACCCGGCCCGACGCATCACCCAGAGCCTCGCCCCGGCCGACCTGCCCAAGGACGGTGGCCGC
TACGACCTGGCCATCGCCCTGGGCATCCTGGCCGCCAATGGCCAGGTACCGGTTGCCGCCCTCGACAGCATCGAATGCCT
GGGCGAACTGGCGCTGTCGGGTACGTTGCGTCCGGTACAGGGCGTACTGCCTGCGGCACTGGCGGCGCGAGACGCGGGTC
GGGCGCTGGTGGTGCCCAAGGAAAACGCCGAAGAGGCGAGCCTGGCCAGCGGCCTGGTGGTGTACGCGGTGGGGCACCTG
CGGGAACTGGTCGCCCACCTGAATGCGCAACCTTCGCTGCCACCCTACGCCGCGAATGGCCTGTTGCTTGAGCAACGCCC
CTACCCGGACCTCAGCGAAGTGCAGGGCCAGATCGCCGCCAAGCGGGCGCTGCTGGTCGCCGCAGCTGGCGCGCACAACC
TGTTGTTCTCCGGCCCGCCGGGCACCGGCAAGACCCTGCTCGCCAGCCGCCTGCCCGGGCTGCTGCCGCCGCTGGACGAG
CGCGAGGCGCTGGAGGTGGCGGCGATCCGCTCTGTCAGTGGCCATGCCCCGCTCGATTGCTGGCCACAGCGGCCTTTTCG
CCATCCTCACCACTCGGCCTCCGGCCCAGCGCTGGTGGGCGGTGGCAGCCGACCGCAACCCGGCGAGATCACCCTGGCGC
ACCACGGCGTGTTGTTTCTCGACGAGCTGCCCGAGTTCGAACGACGCGTGCTGGAGGTACTGCGCGAGCCGCTGGAGTCG
GGCGAGATCGTGGTGGCACGGGCCAAGGACCGGGTGCGCTTCCCGGCGCGCTTTCAGCTGGTGGCGGCCATGAACCCTTG
CCCCTGCGGCTACCTGGGTGACCCCACCGGCCGCTGTCGCTGCAGCAGCGAGCAGATCCAGCGCTACCGCAACAAGCTGT
CCGGCCCCCTGCTCGACCGCATCGACCTGCACCTGACGGTGGCCCGGGAAAGTACCGTGCTGACCCACCAGCCCAGCGGC
GAGACCAGCGCCAGTGTTGGCCAGCAGGTGGCCGAGGCACGGGAGCTGCAGCAGCGCCGGCAGGGCTGCGCCAATGCCTT
CCTCGACCTCAAGGGGCTGCGCCGGCACTGCCCGCTGGAGCCGGTCGACCAGGCCTGGCTGGAGCAGGCCTGCGAACGGT
TGACGTTGTCGTTGCGGGCAGCGCACCGGCTGTTGAAGGTGGCCCGCACCCTGGCGGACCTGGAGGGGGCGCAATCCATC
GCCAGGTCGCACCTGGCGGAGGCGCTGCAGTACCGGCCCAGCGCCTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	55.2	100	0.558
comM	Glaesserella parasuis strain SC1401	54.2	100	0.547
comM	Vibrio campbellii strain DS40M4	54.747	100	0.547
comM	Vibrio cholerae strain A1552	54.545	100	0.545
comM	Legionella pneumophila str. Paris	49.499	100	0.499
comM	Legionella pneumophila strain ERS1305867	49.499	100	0.499
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	47.61	100	0.483