Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   KIW23_RS10650 Genome accession   NZ_CP075561
Coordinates   2156567..2157838 (+) Length   423 a.a.
NCBI ID   WP_070786867.1    Uniprot ID   A0A9Q5P1G4
Organism   Floricoccus penangensis strain ML061-4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2151567..2162838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIW23_RS10630 (KIW23_10645) - 2152282..2153448 (-) 1167 WP_070786863.1 DUF998 domain-containing protein -
  KIW23_RS10635 (KIW23_10650) guaB 2153564..2155045 (-) 1482 WP_070786864.1 IMP dehydrogenase -
  KIW23_RS10640 (KIW23_10655) - 2155157..2155822 (-) 666 WP_251314875.1 YoaK family protein -
  KIW23_RS10645 (KIW23_10660) rlmH 2155844..2156323 (-) 480 WP_070786866.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KIW23_RS10650 (KIW23_10665) htrA 2156567..2157838 (+) 1272 WP_070786867.1 S1C family serine protease Regulator
  KIW23_RS10655 (KIW23_10670) - 2157947..2158744 (+) 798 WP_251314876.1 ParB/RepB/Spo0J family partition protein -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 44482.37 Da        Isoelectric Point: 4.9447

>NTDB_id=569581 KIW23_RS10650 WP_070786867.1 2156567..2157838(+) (htrA) [Floricoccus penangensis strain ML061-4]
MAKNNFIGTVLAGVAGGALALGGNAVYQNNFANTPSTTTTTTTNNGKSTTKVSYVVESDTTKAIDKVSDAVVSVINYQKK
QSGTSLEDFLNGNFDQNGNDDAKEEEAGEGSGVIYKKDGKTAYVVTNNHVVEGASSLEVMLSTGEKVKGELVGKDAFSDL
AVIKIDGSKVKNTAEFGDSSTLKVGEPAIAIGSPLGSQYANSATQGIISSLNRQVTSQNDNRETVSINAIQTDAAINPGN
SGGALINIKGQVIGINSSKIASTSSSVNGISVEGMGFAIPSNDVQSIIDKLEKDGQVSRPALGIEMKNLADIPKESIDKS
LKLPEDVTSGVVVTNVQSNMPAEKAGLKKYDVITKLGDVDTPTYIELQSALYKLNIGDTVKVTYYRNGKKETTDVKLTES
NKNLKQSQNSNDQKQDNSNSGRN

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=569581 KIW23_RS10650 WP_070786867.1 2156567..2157838(+) (htrA) [Floricoccus penangensis strain ML061-4]
ATGGCAAAAAATAATTTCATTGGTACTGTCTTAGCTGGTGTGGCAGGTGGTGCTCTTGCACTAGGTGGAAACGCTGTTTA
TCAAAATAATTTTGCAAATACACCCAGCACAACTACTACTACAACAACAAATAATGGAAAATCAACTACCAAAGTATCAT
ATGTTGTTGAAAGTGATACAACAAAAGCAATTGATAAGGTTTCTGATGCAGTCGTATCTGTTATCAATTATCAAAAGAAA
CAATCAGGAACTTCACTTGAAGATTTTTTAAATGGTAATTTTGATCAAAATGGCAATGATGATGCAAAAGAAGAAGAAGC
TGGTGAAGGTAGTGGTGTAATATATAAGAAAGATGGAAAAACTGCCTATGTGGTTACTAATAATCACGTAGTTGAAGGTG
CTAGCAGTTTAGAAGTAATGCTTTCTACAGGTGAGAAAGTTAAGGGTGAACTTGTAGGTAAAGATGCATTTAGTGATTTA
GCTGTTATCAAAATAGATGGTAGTAAGGTTAAAAATACTGCTGAATTTGGTGATTCTAGTACTCTTAAGGTTGGTGAACC
CGCAATTGCTATTGGATCACCTCTTGGAAGCCAGTATGCAAACTCAGCAACTCAAGGTATAATTTCAAGTCTAAATAGAC
AAGTAACTTCACAAAATGATAATCGTGAAACTGTAAGTATTAATGCAATTCAAACTGATGCTGCTATCAATCCAGGTAAC
TCAGGAGGTGCTTTAATTAATATTAAAGGACAAGTAATTGGGATTAATTCAAGTAAAATCGCATCAACCTCATCTAGCGT
AAATGGAATTTCAGTTGAAGGTATGGGATTTGCTATTCCTTCAAATGATGTCCAAAGTATTATTGATAAATTAGAAAAAG
ATGGACAAGTGTCTCGTCCTGCTTTGGGTATTGAGATGAAAAATCTAGCTGATATCCCTAAAGAGTCTATTGATAAATCT
CTTAAACTTCCAGAAGATGTTACAAGTGGTGTTGTGGTAACAAATGTTCAATCTAACATGCCCGCTGAAAAAGCTGGTTT
GAAGAAATATGATGTAATCACTAAATTAGGTGATGTCGATACCCCAACTTATATTGAGTTACAATCTGCTCTCTATAAAT
TGAATATCGGAGATACAGTAAAAGTTACTTATTATAGAAATGGTAAGAAGGAAACAACAGATGTAAAACTTACTGAATCA
AATAAGAATTTGAAACAATCTCAAAATAGTAATGACCAAAAGCAAGATAATAGTAATAGTGGTCGAAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

57.995

87.234

0.506

  htrA Streptococcus gordonii str. Challis substr. CH1

53.234

95.035

0.506

  htrA Streptococcus mitis NCTC 12261

56.25

86.998

0.489

  htrA Streptococcus pneumoniae TIGR4

56.461

84.161

0.475

  htrA Streptococcus pneumoniae D39

56.461

84.161

0.475

  htrA Streptococcus pneumoniae Rx1

56.461

84.161

0.475

  htrA Streptococcus pneumoniae R6

56.461

84.161

0.475