Detailed information NTG0568544

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KI613_RS00425
• Genome accession: NZ_CP075190
• Coordinates: 99934..101430 (-)
• Length: 498 a.a.
• NCBI ID: WP_226403268.1
• Uniprot ID: -
• Organism: Ferribacterium limneticum strain 76
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 94934..106430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI613_RS00400 (KI613_00400)	-	96974..97408 (+)	435	WP_226403263.1	glycine cleavage system protein H	-
KI613_RS00405 (KI613_00405)	-	97401..97775 (+)	375	WP_226403264.1	DsrE family protein	-
KI613_RS00410 (KI613_00410)	-	97783..98274 (-)	492	WP_226403265.1	hypothetical protein	-
KI613_RS00415 (KI613_00415)	-	98364..98756 (+)	393	WP_226403266.1	rhodanese-like domain-containing protein	-
KI613_RS00420 (KI613_00420)	-	98736..99941 (-)	1206	WP_226403267.1	multidrug effflux MFS transporter	-
KI613_RS00425 (KI613_00425)	comM	99934..101430 (-)	1497	WP_226403268.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KI613_RS00430 (KI613_00430)	-	101435..101677 (-)	243	WP_226403269.1	accessory factor UbiK family protein	-
KI613_RS00435 (KI613_00435)	-	101920..102705 (+)	786	WP_226403270.1	TorF family putative porin	-
KI613_RS00440 (KI613_00440)	glnK	102791..103129 (+)	339	WP_226403271.1	P-II family nitrogen regulator	-
KI613_RS00445 (KI613_00445)	-	103143..104624 (+)	1482	WP_226403272.1	ammonium transporter	-
KI613_RS00450 (KI613_00450)	-	104756..105298 (-)	543	WP_226403273.1	hydrolase	-
KI613_RS00455 (KI613_00455)	purU	105305..106168 (-)	864	WP_226403274.1	formyltetrahydrofolate deformylase	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 53025.64 Da
• Isoelectric Point: 8.2067

>NTDB_id=568544 KI613_RS00425 WP_226403268.1 99934..101430(-) (comM) [Ferribacterium limneticum strain 76]
MALAIAHSRGLDGLNAPPVTVEAHLASGLPSFTLVGLPDTEVKEARDRVRAAIVNSGFEFPSKRITVNLAPADLPKESGR
FDLPIALGILAASGQIPGKHLADYEFAGELSLSGELRPIRGALAMALQTAGHGKHFILPEASAREAALIGSNEILSARSL
LDVCAHLAERETLPQAIATVNPENQPIFADLAEVRGQSQAKRALEIAAAGNHSLLMVGPPGSGKSMLAARLPGLMPALQG
EAAKASAAVLSLVGQFRPEAFGVRPYRQPHHTASAVALVGGGNPPRPGEISLAHQGILFLDELPEFDRKVLETLREPLES
GRVHIARAARQAEFPAEFQLIAAMNPCPCGHHGSSKGKCRCTPDQIARYRGKLSGPFLDRIDLIIEVPALLAESLAGKTD
GESSATVRARVEQAQNRQQARQQKPNARLSTKEVDADCQPDATGNKLLQQATTQLDLSARAWHRILKVARTIADLAACDD
IRAAHVAEAIQYRRFARG

Nucleotide

• Length: 1497 bp

>NTDB_id=568544 KI613_RS00425 WP_226403268.1 99934..101430(-) (comM) [Ferribacterium limneticum strain 76]
GTGGCACTGGCCATCGCGCACAGTCGAGGACTGGATGGCCTGAATGCGCCGCCGGTGACGGTCGAGGCTCATCTGGCCAG
TGGCCTGCCCAGCTTCACCCTCGTCGGCTTGCCGGACACCGAAGTCAAGGAAGCACGCGACCGCGTTCGCGCCGCCATCG
TCAATTCCGGGTTCGAATTTCCGTCCAAGCGCATCACGGTAAACTTGGCCCCGGCCGACCTGCCCAAGGAGTCCGGCCGT
TTTGACCTGCCCATCGCGCTCGGCATCCTCGCCGCCAGCGGGCAGATTCCCGGCAAGCATCTGGCGGACTACGAATTTGC
CGGCGAGTTGTCGCTGTCCGGCGAACTGCGCCCGATTCGCGGCGCGCTGGCCATGGCTTTGCAAACAGCCGGCCACGGCA
AGCATTTCATCCTGCCTGAAGCGAGTGCCCGCGAAGCGGCGCTGATCGGCAGCAACGAAATACTTTCCGCCCGCTCGCTG
CTCGACGTCTGCGCCCACCTCGCCGAGCGCGAGACGCTGCCGCAGGCGATTGCCACGGTCAACCCGGAAAATCAGCCAAT
TTTCGCAGACCTTGCCGAGGTTCGCGGCCAGTCGCAGGCCAAGCGGGCACTGGAGATTGCTGCGGCGGGCAACCATTCGC
TCCTGATGGTCGGTCCGCCTGGTTCTGGCAAATCCATGCTCGCCGCCCGTCTGCCCGGCCTCATGCCGGCGTTGCAGGGC
GAAGCGGCCAAGGCCTCAGCCGCCGTGCTGTCGCTGGTCGGCCAGTTCCGGCCGGAAGCCTTTGGCGTTCGCCCTTACCG
CCAGCCACACCACACCGCCTCGGCCGTGGCCTTGGTCGGTGGCGGCAATCCGCCGCGACCGGGCGAAATCAGTCTGGCCC
ATCAAGGAATTTTGTTTTTGGACGAGCTCCCGGAATTTGACCGAAAAGTCCTCGAAACCCTTCGCGAGCCGCTCGAATCC
GGGCGCGTCCATATTGCCCGCGCCGCCCGGCAGGCCGAGTTTCCGGCCGAGTTCCAGCTCATCGCAGCGATGAATCCGTG
TCCGTGTGGGCATCACGGCTCGTCGAAAGGCAAATGCCGCTGCACGCCGGACCAGATCGCCCGCTATCGCGGCAAGCTCT
CCGGGCCCTTCCTCGACCGCATCGACCTGATCATCGAGGTTCCCGCGCTGTTGGCTGAGAGCCTTGCCGGCAAGACCGAT
GGCGAATCGTCAGCCACCGTTCGCGCTCGCGTCGAGCAAGCCCAGAATCGCCAGCAGGCCCGGCAACAGAAACCGAACGC
CCGGCTGAGCACCAAGGAAGTCGATGCCGACTGCCAGCCCGACGCCACCGGCAACAAGTTGCTGCAACAGGCAACGACCC
AGCTCGACCTGTCGGCCCGCGCCTGGCACCGCATCCTCAAAGTCGCCCGGACCATCGCCGATCTGGCCGCCTGCGACGAC
ATCCGCGCCGCCCACGTCGCCGAGGCCATCCAGTATCGACGTTTCGCCCGTGGGTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-141)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	53.908	100	0.54
comM	Vibrio campbellii strain DS40M4	53.106	100	0.532
comM	Glaesserella parasuis strain SC1401	51.69	100	0.522
comM	Haemophilus influenzae Rd KW20	51.587	100	0.522
comM	Legionella pneumophila str. Paris	49.901	100	0.504
comM	Legionella pneumophila strain ERS1305867	49.901	100	0.504
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.488	100	0.454