Detailed information NTG0568521

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KI610_RS00340
• Genome accession: NZ_CP075189
• Coordinates: 79230..80726 (-)
• Length: 498 a.a.
• NCBI ID: WP_226496750.1
• Uniprot ID: -
• Organism: Ferribacterium limneticum strain 77
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 74230..85726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI610_RS00315 (KI610_00315)	-	76270..76704 (+)	435	WP_226496745.1	glycine cleavage system protein H	-
KI610_RS00320 (KI610_00320)	-	76697..77071 (+)	375	WP_226496746.1	DsrE family protein	-
KI610_RS00325 (KI610_00325)	bamE	77079..77570 (-)	492	WP_226496747.1	outer membrane protein assembly factor BamE	-
KI610_RS00330 (KI610_00330)	-	77660..78052 (+)	393	WP_226496748.1	rhodanese-like domain-containing protein	-
KI610_RS00335 (KI610_00335)	-	78032..79237 (-)	1206	WP_226496749.1	multidrug effflux MFS transporter	-
KI610_RS00340 (KI610_00340)	comM	79230..80726 (-)	1497	WP_226496750.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KI610_RS00345 (KI610_00345)	-	80731..80973 (-)	243	WP_226496751.1	accessory factor UbiK family protein	-
KI610_RS00350 (KI610_00350)	-	81217..81963 (+)	747	WP_226496752.1	TorF family putative porin	-
KI610_RS00355 (KI610_00355)	glnK	82048..82386 (+)	339	WP_226403271.1	P-II family nitrogen regulator	-
KI610_RS00360 (KI610_00360)	-	82400..83884 (+)	1485	WP_226496753.1	ammonium transporter	-
KI610_RS00365 (KI610_00365)	-	84013..84555 (-)	543	WP_226496754.1	hydrolase	-
KI610_RS00370 (KI610_00370)	purU	84559..85422 (-)	864	WP_226496755.1	formyltetrahydrofolate deformylase	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 52992.57 Da
• Isoelectric Point: 8.2106

>NTDB_id=568521 KI610_RS00340 WP_226496750.1 79230..80726(-) (comM) [Ferribacterium limneticum strain 77]
MALAIAHSRGLDGLNAPPVTVEAHLASGLPSFTLVGLPDTEVKEARDRVRAAIVNSGFEFPSKRITVNLAPADLPKESGR
FDLPIALGILAASGQIPGKHLADYEFAGELSLSGELRPIRGALAMALQTAGHGKHFILPEASAREAALIGSNEILSARSL
LDVCAHLAERESLPQAIATVNPENQPIFADLAEVRGQSQAKRALEIAAAGNHSLLMVGPPGSGKSMLAARLPGLMPALQG
EAAKSSAAVLSLVGQFRPEAFGVRPYRQPHHTASAVALVGGGNPPRPGEISLAHQGILFLDELPEFDRKVLETLREPLES
GRVHIARAARQAEFPAEFQLIAAMNPCPCGHHGSSKGKCRCSPDQIARYRGKLSGPFLDRIDLIIEVPALLAESLAGKAD
GESSATVRARVEHAQNRQQARQQKPNARLSTKEVDADCQPDATGNKLLQQATTQLDLSARAWHRILKVARTIADLAACDD
IRAAHVAEAIQYRRFARG

Nucleotide

• Length: 1497 bp

>NTDB_id=568521 KI610_RS00340 WP_226496750.1 79230..80726(-) (comM) [Ferribacterium limneticum strain 77]
GTGGCACTGGCCATCGCGCACAGTCGAGGACTGGATGGCCTGAACGCGCCGCCGGTGACTGTCGAGGCTCATCTGGCCAG
TGGCCTGCCCAGCTTCACCCTCGTCGGCTTGCCGGATACCGAAGTCAAGGAAGCGCGTGACCGCGTTCGCGCCGCCATCG
TCAATTCCGGCTTCGAGTTTCCGTCCAAACGAATTACGGTAAATCTGGCACCAGCCGACCTACCGAAAGAATCCGGCCGT
TTTGACCTGCCCATCGCCCTCGGCATCCTCGCTGCCAGCGGGCAGATTCCCGGCAAGCATCTGGCCGATTATGAATTTGC
CGGCGAGTTGTCGCTGTCCGGCGAACTGCGCCCGATTCGCGGTGCACTCGCCATGGCCTTGCAAACGGCAGGGCACGGCA
AGCATTTCATCCTGCCCGAAGCCAGCGCCCGCGAAGCTGCGCTGATCGGCAGCAATGAAATACTCTCCGCCCGCTCGCTG
CTCGATGTCTGCGCCCACCTCGCCGAGCGTGAGTCGTTGCCGCAGGCGATTGCCACGGTCAACCCGGAAAATCAGCCAAT
TTTCGCAGACCTTGCTGAGGTTCGCGGCCAGTCGCAGGCCAAGCGGGCGCTGGAAATCGCTGCCGCTGGCAACCATTCCT
TATTGATGGTCGGCCCGCCCGGCTCCGGCAAATCCATGCTCGCCGCCCGTCTGCCCGGCCTCATGCCGGCCTTGCAGGGC
GAAGCGGCCAAATCGTCGGCTGCCGTGCTGTCGCTGGTCGGCCAGTTCCGACCGGAAGCCTTCGGCGTTCGCCCTTACCG
CCAGCCGCACCACACCGCCTCCGCCGTAGCGCTGGTCGGTGGCGGCAACCCGCCACGGCCCGGCGAAATCAGCCTGGCGC
ATCAAGGCATTCTGTTTTTGGATGAACTGCCCGAGTTTGACCGGAAAGTCCTCGAAACCCTGCGCGAACCGCTCGAATCC
GGGCGCGTCCATATCGCCCGCGCCGCCCGGCAGGCCGAGTTTCCGGCCGAATTCCAGCTCATCGCGGCAATGAATCCGTG
TCCATGTGGGCATCATGGATCGTCGAAAGGCAAATGCCGCTGCTCGCCGGACCAGATTGCCCGCTATCGCGGCAAGCTCT
CCGGACCCTTCCTCGACCGCATCGACCTGATCATCGAAGTTCCCGCGCTGCTTGCCGAAAGCCTCGCCGGCAAGGCCGAT
GGCGAATCGTCAGCGACCGTTCGCGCCCGCGTCGAGCATGCCCAGAATCGCCAGCAGGCCCGGCAACAGAAACCAAACGC
CCGGCTGAGCACCAAGGAAGTCGATGCCGACTGCCAACCCGACGCAACCGGCAACAAGTTGCTGCAACAGGCAACGACCC
AGCTCGACCTGTCGGCCCGCGCCTGGCACCGCATCCTCAAAGTCGCGCGAACCATTGCCGACCTGGCCGCCTGCGACGAC
ATTCGCGCCGCCCACGTCGCCGAAGCCATCCAGTATCGACGTTTCGCCCGTGGGTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-141)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-392)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	53.707	100	0.538
comM	Vibrio campbellii strain DS40M4	52.906	100	0.53
comM	Haemophilus influenzae Rd KW20	51.786	100	0.524
comM	Glaesserella parasuis strain SC1401	51.69	100	0.522
comM	Legionella pneumophila str. Paris	49.901	100	0.504
comM	Legionella pneumophila strain ERS1305867	49.901	100	0.504
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.685	100	0.456