Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/comD3   Type   Regulator
Locus tag   KIP81_RS08810 Genome accession   NZ_CP075172
Coordinates   1775487..1776866 (-) Length   459 a.a.
NCBI ID   WP_243602839.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   phosphorylation of ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1770487..1781866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS08795 (KIP81_08785) comE/comE2 1771372..1772100 (-) 729 WP_024343524.1 LytTR family DNA-binding domain-containing protein Regulator
  KIP81_RS08800 (KIP81_08790) comD/comD3 1772718..1774109 (-) 1392 WP_243602837.1 GHKL domain-containing protein Regulator
  KIP81_RS08805 (KIP81_08795) comD/comD3 1774102..1775118 (-) 1017 WP_243602838.1 GHKL domain-containing protein Regulator
  KIP81_RS08810 (KIP81_08800) comD/comD3 1775487..1776866 (-) 1380 WP_243602839.1 GHKL domain-containing protein Regulator
  KIP81_RS08815 (KIP81_08805) - 1776873..1777070 (-) 198 WP_243602840.1 hypothetical protein -
  KIP81_RS08820 (KIP81_08810) - 1777232..1777525 (-) 294 WP_074630224.1 bacteriocin immunity protein -
  KIP81_RS08825 (KIP81_08815) - 1777556..1777861 (-) 306 WP_134775646.1 bacteriocin immunity protein -
  KIP81_RS08830 (KIP81_08820) - 1777881..1778177 (-) 297 WP_081341079.1 DUF3884 family protein -
  KIP81_RS08835 (KIP81_08825) comC/comC1 1778365..1778514 (+) 150 WP_200769438.1 hypothetical protein Regulator
  KIP81_RS08840 (KIP81_08830) - 1778531..1779853 (-) 1323 WP_243602841.1 GHKL domain-containing protein -
  KIP81_RS08845 (KIP81_08835) comE/comE1 1779858..1780589 (-) 732 WP_243602842.1 response regulator transcription factor Regulator
  KIP81_RS08850 (KIP81_08840) - 1781545..1781853 (-) 309 WP_074567284.1 bacteriocin immunity protein -

Sequence

Protein


Download         Length: 459 a.a.        Molecular weight: 52699.30 Da        Isoelectric Point: 5.4729

>NTDB_id=568269 KIP81_RS08810 WP_243602839.1 1775487..1776866(-) (comD/comD3) [Streptococcus equinus strain SheepZ001]
MIFMEVLGVLMNFSSFLILGVLFQQITKNKLTLGEWIFGILFIQIFSFGLAYSFVYRFNIAVLITKDVAPAACLMLISYH
HNPRISFRYHLFYALYPINVHIILQRVYAYLLMMLFSIEITPRFDTAPIVTIIATIIAIFIPPVLYYLISKWLNIDISNV
RKTLKNYLSSGVLTIVNILMVVYYFGNDYLALEVPSDSPILKIIVRTGAFIYLFLLFAFLFYLNFRHGQEQKEELLRNQE
MELAALENYSKHVESLYQEVRSFRHDYANVLMSLKVGIDQGDLDNIKKIYEEITADSAKLVKNNKFDLTRLANISDSAVK
SLMSAKFLEVENRSIEISLEVSELMKNPAIPLISYIRILSILFDNAIEGALESAEPKIAVANFYQDGDFVFIIENSTKEK
SVDLSNIFQRGYSTKGENRGLGLATLVDFQDDYENLSVETHSSDYTFTQVVRIYEGDSR

Nucleotide


Download         Length: 1380 bp        

>NTDB_id=568269 KIP81_RS08810 WP_243602839.1 1775487..1776866(-) (comD/comD3) [Streptococcus equinus strain SheepZ001]
ATGATTTTTATGGAAGTATTAGGGGTTCTGATGAATTTTTCGTCTTTTTTAATATTAGGAGTTTTATTTCAGCAGATAAC
TAAAAATAAACTCACTTTAGGAGAGTGGATTTTTGGAATATTATTTATTCAAATTTTTTCTTTTGGGCTTGCCTACAGTT
TTGTCTATCGTTTTAATATTGCTGTTCTAATAACTAAGGATGTTGCGCCAGCAGCCTGTTTGATGTTAATTTCATATCAT
CATAATCCTAGAATTAGTTTTAGGTATCATCTTTTTTATGCTTTATATCCTATTAATGTTCACATCATTTTACAAAGGGT
ATATGCCTATTTATTAATGATGCTCTTTTCAATTGAAATTACTCCTCGGTTTGACACTGCGCCGATAGTTACAATTATTG
CTACAATTATCGCTATTTTTATACCGCCAGTTTTATATTATTTGATATCAAAGTGGCTTAATATTGATATTTCAAATGTT
CGAAAAACATTAAAAAATTATCTAAGTTCAGGAGTTTTGACGATTGTTAATATTTTAATGGTGGTTTATTATTTTGGAAA
TGATTATCTTGCTTTAGAGGTGCCATCGGATTCCCCAATTTTAAAAATAATTGTGAGAACTGGTGCTTTTATCTATTTAT
TCCTTCTTTTTGCCTTCCTCTTCTATCTTAACTTCCGTCACGGGCAGGAGCAGAAAGAAGAGTTGCTTCGCAATCAGGAA
ATGGAGCTTGCGGCTTTAGAAAATTACAGCAAGCACGTAGAAAGTCTGTACCAAGAAGTGCGCAGTTTTCGTCACGATTA
CGCTAATGTTTTGATGAGTTTAAAGGTCGGCATTGATCAAGGTGATCTTGATAATATCAAGAAAATTTACGAAGAAATCA
CGGCTGACTCAGCGAAGCTGGTCAAAAACAATAAGTTTGATTTGACGCGATTAGCAAATATTTCAGACAGTGCCGTCAAG
AGTCTCATGTCGGCTAAATTTTTGGAGGTTGAAAATCGAAGTATTGAAATTAGTTTAGAAGTGTCAGAACTGATGAAGAA
TCCAGCTATTCCGTTGATTTCCTATATTCGAATTTTGTCGATTCTGTTTGATAATGCCATAGAAGGAGCTTTGGAATCTG
CAGAGCCAAAAATCGCAGTAGCGAATTTTTACCAAGATGGAGATTTTGTGTTTATCATTGAAAATTCGACTAAGGAAAAA
TCTGTGGATTTATCTAATATTTTCCAGCGTGGGTACTCAACAAAAGGTGAGAATCGTGGACTTGGTCTTGCGACATTGGT
TGATTTTCAGGATGATTACGAAAATCTGTCGGTTGAAACCCACAGTTCAGATTACACATTCACACAAGTTGTGAGAATAT
ATGAGGGAGATAGTAGATGA

Domains

Predicted by InterproScan.

GHKL domain (HATPase_c_5)

(356-453)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/comD3 Streptococcus equinus JB1

67.982

99.346

0.675
  comD/comD2 Streptococcus equinus JB1

78.616

69.281

0.545