Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/comD3   Type   Regulator
Locus tag   KIP81_RS08800 Genome accession   NZ_CP075172
Coordinates   1772718..1774109 (-) Length   463 a.a.
NCBI ID   WP_243602837.1    Uniprot ID   -
Organism   Streptococcus equinus strain SheepZ001     
Function   phosphorylation of ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1767718..1779109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIP81_RS08775 (KIP81_08765) - 1768916..1769548 (-) 633 WP_243602836.1 thiamine diphosphokinase -
  KIP81_RS08780 (KIP81_08770) rpe 1769541..1770203 (-) 663 WP_024343526.1 ribulose-phosphate 3-epimerase -
  KIP81_RS08785 (KIP81_08775) rsgA 1770210..1771082 (-) 873 WP_027968346.1 ribosome small subunit-dependent GTPase A -
  KIP81_RS08795 (KIP81_08785) comE/comE2 1771372..1772100 (-) 729 WP_024343524.1 LytTR family DNA-binding domain-containing protein Regulator
  KIP81_RS08800 (KIP81_08790) comD/comD3 1772718..1774109 (-) 1392 WP_243602837.1 GHKL domain-containing protein Regulator
  KIP81_RS08805 (KIP81_08795) comD/comD3 1774102..1775118 (-) 1017 WP_243602838.1 GHKL domain-containing protein Regulator
  KIP81_RS08810 (KIP81_08800) comD/comD3 1775487..1776866 (-) 1380 WP_243602839.1 GHKL domain-containing protein Regulator
  KIP81_RS08815 (KIP81_08805) - 1776873..1777070 (-) 198 WP_243602840.1 hypothetical protein -
  KIP81_RS08820 (KIP81_08810) - 1777232..1777525 (-) 294 WP_074630224.1 bacteriocin immunity protein -
  KIP81_RS08825 (KIP81_08815) - 1777556..1777861 (-) 306 WP_134775646.1 bacteriocin immunity protein -
  KIP81_RS08830 (KIP81_08820) - 1777881..1778177 (-) 297 WP_081341079.1 DUF3884 family protein -
  KIP81_RS08835 (KIP81_08825) comC/comC1 1778365..1778514 (+) 150 WP_200769438.1 hypothetical protein Regulator

Sequence

Protein


Download         Length: 463 a.a.        Molecular weight: 53317.45 Da        Isoelectric Point: 8.3217

>NTDB_id=568267 KIP81_RS08800 WP_243602837.1 1772718..1774109(-) (comD/comD3) [Streptococcus equinus strain SheepZ001]
MIEIIRFIIALLLNFWGFVIIGFLFQQITKTKITLLEWFAIIMFVQIGSIAFGNLTGNTLKIGLLVIKDIVVIFGFMIIS
CRHNPKLEIRYHIFYALYPNSLYLIIQGVYGYTMMGIFSIKITPMAAQVHSWLVWIITITAIFAPPIFYHLMSKWLNIDI
SNVRKTLKHYLSARALRVVNVLLLIFYPGIECFAAILPFEKMSTNRNVYRLTFLVYFLLLFAFLFYLNFRHGQEQKEELL
RNQEMELKALENYSKHVESLYQEVRSFRHDYANVLMSLKVGIDQGDLDNIKKIYEEITADSAKLVKNNKFDLTRLANISD
SAVKSLMSAKFLEAENRGIEISLEVAEPMKNPAIPLISYIRILSILFDNAIEGALESENPKIAVANFYQNGDFVFIIENS
TREKSVDLSKIFQRGYSTKGENRGLGLATLVDFQDDYENLSVETSSLDYKFTQVVRVYEGKNG

Nucleotide


Download         Length: 1392 bp        

>NTDB_id=568267 KIP81_RS08800 WP_243602837.1 1772718..1774109(-) (comD/comD3) [Streptococcus equinus strain SheepZ001]
ATGATTGAAATTATTAGATTTATTATTGCATTGCTTTTGAATTTTTGGGGATTTGTTATAATTGGTTTTCTTTTCCAGCA
AATAACTAAAACTAAGATAACTCTCTTAGAATGGTTTGCAATAATTATGTTTGTCCAAATTGGGTCTATTGCTTTTGGCA
ACCTAACTGGCAATACTTTAAAGATAGGTTTATTAGTTATAAAAGATATCGTTGTTATTTTTGGTTTTATGATAATATCA
TGCAGACACAACCCAAAACTAGAAATCAGATATCACATTTTTTATGCTTTATATCCAAATAGTCTCTATTTGATTATACA
AGGAGTTTATGGATATACAATGATGGGGATTTTTTCAATAAAAATAACTCCGATGGCAGCCCAAGTACATTCTTGGCTAG
TTTGGATTATCACTATTACAGCTATTTTTGCCCCACCAATTTTTTATCATTTGATGTCGAAATGGTTAAATATTGATATT
TCAAATGTTCGAAAGACGCTAAAACATTATCTTAGTGCAAGAGCATTAAGAGTTGTAAATGTTCTATTGCTGATTTTTTA
TCCGGGTATAGAATGTTTTGCAGCAATATTACCTTTTGAAAAAATGTCAACGAATAGAAATGTTTATAGACTAACTTTTC
TTGTCTATTTTCTTCTCCTTTTTGCCTTCCTCTTCTATCTTAACTTCCGTCACGGGCAGGAGCAGAAAGAAGAATTGCTC
CGCAATCAGGAAATGGAGCTTAAAGCTTTGGAAAATTACAGCAAGCACGTAGAGAGTCTGTACCAAGAAGTGCGCAGTTT
TCGCCATGATTATGCCAACGTTTTGATGAGTTTAAAGGTCGGCATTGATCAAGGTGATCTTGATAATATCAAGAAAATTT
ACGAAGAAATCACAGCTGACTCAGCGAAGCTGGTCAAAAACAATAAGTTTGATTTGACGCGACTAGCAAATATTTCAGAC
AGTGCCGTCAAGAGTCTCATGTCGGCTAAATTTTTGGAGGCTGAAAATCGTGGCATTGAAATTAGTCTAGAAGTGGCAGA
GCCGATGAAAAATCCAGCTATTCCGTTGATTTCTTACATTCGAATTTTATCAATTCTGTTTGATAATGCCATCGAAGGAG
CTTTAGAGTCGGAAAATCCCAAAATCGCAGTAGCGAATTTTTACCAAAACGGAGATTTTGTGTTTATCATTGAAAATTCG
ACTAGGGAAAAATCTGTAGATTTATCCAAAATTTTCCAACGCGGTTACTCTACAAAAGGTGAGAATCGCGGACTTGGACT
TGCGACATTGGTTGATTTTCAGGATGATTATGAAAATTTGTCAGTTGAAACTAGCAGTCTCGATTACAAATTTACACAAG
TTGTGAGAGTTTATGAGGGGAAAAATGGCTAA

Domains

Predicted by InterproScan.

GHKL domain (HATPase_c_5)

(360-455)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/comD3 Streptococcus equinus JB1

73.913

99.352

0.734
  comD/comD2 Streptococcus equinus JB1

73.077

67.387

0.492