Detailed information NTG0056725

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: AZKH_RS19455
• Genome accession: NC_020516
• Coordinates: 4353922..4355301 (-)
• Length: 459 a.a.
• NCBI ID: WP_015437511.1
• Uniprot ID: -
• Organism: Azoarcus sp. KH32C
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4348922..4360301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AZKH_RS26415 (AZKH_3922)	-	4349127..4352069 (+)	2943	WP_083903104.1	glycosyltransferase	-
AZKH_RS19445 (AZKH_3923)	-	4352178..4352957 (+)	780	WP_015437509.1	TylF/MycF/NovP-related O-methyltransferase	-
AZKH_RS19450 (AZKH_3924)	-	4353266..4353910 (+)	645	WP_156822133.1	hypothetical protein	-
AZKH_RS19455 (AZKH_3925)	pilR	4353922..4355301 (-)	1380	WP_015437511.1	sigma-54 dependent transcriptional regulator	Regulator
AZKH_RS19460 (AZKH_3926)	-	4355298..4356851 (-)	1554	WP_015437512.1	nitrogen regulation protein NR(II)	-
AZKH_RS19465 (AZKH_3927)	-	4356862..4357107 (-)	246	WP_015437513.1	PP0621 family protein	-
AZKH_RS19470 (AZKH_3928)	-	4357159..4358316 (-)	1158	WP_041657609.1	pyridoxal phosphate-dependent aminotransferase	-
AZKH_RS19475 (AZKH_3929)	mtnA	4358657..4359724 (+)	1068	WP_015437515.1	S-methyl-5-thioribose-1-phosphate isomerase	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 50480.62 Da
• Isoelectric Point: 5.5338

>NTDB_id=56725 AZKH_RS19455 WP_015437511.1 4353922..4355301(-) (pilR) [Azoarcus sp. KH32C]
MTQPERRNRPRGIDVLVVDDEEDIREVLELSLLRMGLACDTAGTVADARRLLDEKPYRLCLTDMRLPDGDGLELVAHIQS
HIPGLPVAVITAFGSIETAIRALKCGAFDFVTKPVELKALREIVSHALNVQSAPGLGENAGGRSLIGRSAALEQLRSQIS
KLARNQAPVFILGESGTGKEVIARLIHESGPRANAPFVPVNCGAIAPELMESEFFGHRKGSFTGAVSDKDGLFQAARGGT
LFLDEVADLPLAMQVKLLRAIQERAVRPVGAHAEEPVDVRILSASHRDLGQLVAEGKFRQDLYFRINVITLRVPPLRERP
EDIPELAEHILARLAEREGGAPRRLTREASQLLAQHSFAGNVRELENLLERACALCDGDEITGPDLSLHPTEGLAQPLVF
FNASGDVHDDVAESDSDSDERALVLRMLDETRWNRSEAARRLGMTLRQLRYRLQKWGME

Nucleotide

• Length: 1380 bp

>NTDB_id=56725 AZKH_RS19455 WP_015437511.1 4353922..4355301(-) (pilR) [Azoarcus sp. KH32C]
ATGACGCAACCCGAACGACGCAATCGCCCGAGGGGGATCGATGTACTGGTCGTGGACGACGAAGAAGACATCCGCGAAGT
GCTCGAACTCTCGCTGCTGCGCATGGGGCTCGCCTGCGATACCGCCGGGACCGTTGCCGATGCCCGCCGGCTGCTGGACG
AAAAGCCCTACCGGCTGTGCCTCACCGACATGCGCCTGCCGGATGGCGATGGACTGGAACTGGTTGCCCACATCCAGTCG
CACATTCCCGGGCTTCCTGTGGCCGTGATTACCGCATTCGGCAGCATCGAGACGGCAATCCGCGCCCTCAAGTGTGGCGC
ATTCGATTTCGTGACCAAGCCGGTCGAACTCAAGGCGCTGCGCGAAATCGTCAGTCACGCATTGAACGTGCAGAGCGCGC
CGGGCTTGGGAGAAAACGCCGGCGGCCGCAGTCTGATCGGGCGCTCCGCCGCGCTCGAGCAACTGCGTAGCCAGATATCG
AAGCTCGCGCGCAACCAGGCGCCCGTCTTCATCCTCGGCGAATCCGGTACCGGCAAGGAAGTCATCGCCCGCCTGATTCA
CGAGTCCGGGCCGCGTGCGAATGCCCCCTTCGTTCCGGTCAATTGCGGCGCCATCGCACCTGAACTGATGGAAAGCGAGT
TCTTCGGACATCGCAAGGGGAGCTTCACTGGCGCCGTATCCGACAAGGACGGCCTTTTCCAGGCTGCACGGGGCGGCACG
CTGTTCCTCGACGAAGTCGCCGACCTGCCCTTGGCGATGCAGGTGAAGCTCCTGCGCGCGATTCAGGAGCGAGCGGTACG
ACCCGTTGGCGCCCACGCCGAAGAACCGGTGGATGTCCGCATCCTGTCTGCCTCCCATCGCGACCTCGGGCAATTGGTCG
CCGAAGGCAAGTTTCGTCAGGACCTCTACTTCCGCATCAACGTCATCACCTTGCGTGTGCCGCCGCTACGCGAGCGGCCG
GAGGACATCCCCGAGCTGGCGGAGCACATCCTTGCCCGACTCGCTGAGCGCGAGGGTGGCGCTCCGCGGCGGCTGACCCG
TGAAGCAAGCCAACTGCTGGCACAGCATTCCTTTGCCGGCAACGTTCGCGAGCTGGAAAATTTGCTCGAAAGAGCCTGCG
CGCTGTGTGACGGTGACGAGATCACTGGCCCCGATCTCAGTCTCCATCCGACAGAGGGGCTAGCGCAGCCCTTAGTCTTC
TTCAATGCAAGCGGCGATGTTCATGACGATGTTGCGGAGAGCGATTCGGACAGCGACGAACGCGCGCTGGTGCTGCGCAT
GCTCGATGAGACGCGCTGGAACCGCAGCGAGGCAGCGCGTCGGCTTGGGATGACGCTCAGACAGTTGCGGTACCGGTTGC
AGAAGTGGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (15-124)

• Bacterial regulatory protein, Fis family (HTH_8) (420-456)

• Sigma-54 interaction domain (Sigma54_activat) (145-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.135	96.732	0.582
pilR	Acinetobacter baumannii strain A118	49.138	100	0.497