Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   A9D71_RS14090 Genome accession   NZ_CP074661
Coordinates   2864215..2864820 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN008104     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2859215..2869820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9D71_RS14075 (A9D71_14075) helD 2859432..2861486 (-) 2055 WP_000420505.1 DNA helicase IV -
  A9D71_RS14080 (A9D71_14080) - 2861610..2862056 (+) 447 WP_001261222.1 YccF domain-containing protein -
  A9D71_RS14085 (A9D71_14085) yccS 2862075..2864228 (+) 2154 WP_069057544.1 YccS family putative transporter -
  A9D71_RS14090 (A9D71_14090) sxy/tfoX 2864215..2864820 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  A9D71_RS14095 (A9D71_14095) sulA 2865037..2865546 (+) 510 WP_000288733.1 SOS-induced cell division inhibitor SulA -
  A9D71_RS14100 (A9D71_14100) ompA 2865903..2866955 (+) 1053 WP_001674965.1 porin OmpA -
  A9D71_RS14105 (A9D71_14105) matP 2867027..2867479 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  A9D71_RS14110 (A9D71_14110) - 2867665..2869425 (+) 1761 WP_000156448.1 Lon protease family protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=565592 A9D71_RS14090 WP_001202375.1 2864215..2864820(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN008104]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=565592 A9D71_RS14090 WP_001202375.1 2864215..2864820(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN008104]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCCCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTTCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751